Detail



ID : Ahg950771

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950771|scaffold_802658.1
Sequence
CTGCTCGAAA GAGAAGCCAG AAATGGACAA GGATCTCTTA GATATCTCTG GAGAAGACGA CGAAGATAAT TGGCTTCTGA AAAATACGCC GAAGAAAGTT CATTCGGGAC GAGAAAAGAG TTATTTGAAT TGCTCGCCTC TCCAAATCCC TAGATCTAGT CGTATCGTTC CTACTCGGCC CCCTTTTTCA CCAATTGGAA GAGTAACTGG TACCAGCAAC AACATGGAGC AGCCATGCGC TTCTGTTGAT ACAGATAGTG TTGGAAAGGA GAATTCTAAA GTTGAATTGC CCAAATTGAG TGTGGAGCGA CAACAGATGA AGAAGAAGAA AAAGAATGCA GGATTTAATT TGCGCAAAAG TTTAGCATGG GATCGAGCTT TTTCAACGGA AGAAGGTGTT TTGGATTCAT CTGAGCTATC TAAAATAACT GGAACTGCTT GCCAATTTGG TGGAGATCGG TTACCTGCCA TTCAGGAAGA GTTCAGGGAG TCAATGTCAG CTTCTAAATG TACTAGTGTT TCACCAGGAC TACAAGCACT TGAAGAAAAC TTATTTAACG ACTTGCCTGT GAATAGTAAA AACAGAGAGA AGAAGCTTCT GAGTGCATCA CGTAGCAGGG AGCTGAGCAT ATCTAAAGTT CCTACTACCA AACCTGAGCC ACTTACAGTT GCAAACAACA TGAAAAGGAC TACGCAAAGT CCAAGCAAAG CGAAAAAAAG TCAACCTACT CAACTAAAGA ATTCTCAGAG GAGCTTAGGA TCTGAAGGCT TCTCTAAAAA CACTTCAAGC ACCAAGAGTA AAACAAAATC CAGTCTGGCG AGTAAATCTT CAATTCCTAA GCCCTCTCTT AAGCAAGCTA GAAGAAATGT GATCAGCAAA ACATCAGAAA TTCCTTCAGT ATCCAACTCA CAGCATTCTG TTGTTGCAAA GTCCAACGTT GGCCCTATGA CTGCGTCAGA TGTGGCTATG TTTGGTCCTG CATCGGATAT TCCAGAGTCC AATGTAATTA CTCTGGGAAC CTCGTTAACT CAAAGTTCTT GCAATAGACT TGGAAACACG CAGTCCGCAG TTTCACGACT GGGAAAGCCA TCAGGCTTAA GAGTGCCAAA ACCTTCAATT GGCTATTTCA GTCAGTCTGA CTCTCAACTG TCGCACAGTG CAGGAGACAA ACATAGTCAG CTTCCCAGAT CTGATGTTTC TTCAGCCTCT CATATTTCTT TGATCCCTAC CTTCAAGAAA CCTCAAGTTG CTGAAAAGCT TCCTGGTGTC AAATCCAAGG CAGCAACTGG AATTTTTGGC AGTTCAGGTT CAGCTGCAAG ATTCTCTGCT CAATCTATAT GTCTCAAATC TTCACAAGAA AAGGTGAAAG TGGACTTGAA TAGCACTCAG AAATTAGAAT CCAATGCGTT GTGTTGTTCA CTGAGTTCTC AGATAAATGA AAATCTGCAG CACCAAATTG CCATTCAAGG TGATACTGGA AAAGTACTTC TGGATGATGT AACTTATTGT ACATCTGAGA AGAATTCTAC TGCAAGTCAA GAATTCCAGA GTAACAATGA GCTACCGCTC TCAGGCTGCA AAAATAATGT GCAGGATGGT AGTAATATGT CTGACCATAA TAGAGATGAG AAAAGGAAGT CTTGCCGCTC AGTAGAAGAA TACTGTGCTT TACCGCTGAA AGATTCTGTG GATTCTCCAA TGCAGGGTCC TCCTTCCGAT GAGTTGACAC TGTTTGATAC CTACTCACAG TTGAAAGTCA GCAATCCGGG GGAAGAAGAT ATGTGTACTA CCAATGATTT TAGTGGAGAT TTTGATACAT TGGATGTACA TGGACAACCT CTAAATGAAT GCGTGCACCC TGGAAATGAA GACGAGATTA GTCCTTGCCT TTCTGGTGAA GATGATGCTT TAATTGTGTA TCATTCTACT AAAAATGTAG CAAAGCAGCC TGAGGTTTTA TATTCCGTCA CCGCAGACCC AACTTTCTTT GAAGATTTTG CTTCAATAAA GGGTGATGTA GACAATCTAT CTTCTTCAGA AAATCGGTTA GGTAATACTA AATATGTTTC CATACCTTTG GGGCCTTCTG AAGCACCAGA ATGTGTTCAA TCACCATGCA ATCATCTTGA GGAAAATGCG GTGGCGAACT CTATTTTGTG TGATCATAAC ATGGTGTGTG ATGGTCAAGC TGTATTAGAA ACGGAGAAGA GAATAGAAAT AAGCGAAAGC ACAGAGACAA ACTGTGAGGC TGATTTCATT GGTCCAAGTT CCGAATGCAA AGACTGGTTT AGAGAATCTG AAGAACAACA TTTGTCGAGC CAATTAGTCC TTGAGGTGAA AGAGGGTGGT CATGAGTTCG ATGTCTTGAT CAGAAACGAA GGAGCTGATG GGCCTGGCAT GCAGATAGAA TGCCTTCCAC CCGTTGAAGT TAGGATGGAG ATTAACCCTC TGGAATCATC TCATGAACCC TTCTCTGAGA AATCAACTCC TGAAAAGCAG AAGCAACACA ATTGTTCCAG CAGTGAAAAT ACATCTGATG TAAATGATGG TTGTGTAATG AAACAAGCGG ATCAACTTGG AACATTAGTT GGTTGTTCTC CAGAAAAAGA CGCATCTTCT GCTGTTTTCT CTTATTCAAA TGAGGAGCTT GAAGATTACT CTGAGCTGGA AGACATGGAT TTGGGTACAG ACTCAGATTG TTCAGATGAG GAGGCTGAGG ATAATTTGGA GCGGACAGAG ATGCTTGGGG TTACTGATCC TGTGCTCATT AGTGACCTTG ATGAGTTTTC TGTCAAGGGC ATTCTTAATC AAGAATATCC CCAAGAAGAA GATATCCATA CTGCATCAGA CCTGTGTGGA AAAACTAAAA ATCTACTACG TGAATCAATC AGTTCCTCGG ATTCTATATT TGGAGATCCT GAGTGTCTAA ATGAAGGCAC AAATTTTTCC AGAATCTCTG AAGACATGTC AAAAGAGGAT TCAAATTCTG GACGTATTGA GCATAAATAT GTTGTAAAAG CTGAATACCA GATAGAAGCT GAAAAAAATT TCAGTGCACA GGTTACTGGT CAAGAACTCG TCCCCGATGA GGGAAAGGAA GTTAAAGTTG TAAAGATCTC TCCTGATCCT GTAGTATTTG CGCTCAGAGA GGAAGAATCA GGAACTCCTA TACCCACAAA AGAGACTTTC TCAGTCAGAG ATGATATGCA GATTAGCGAG TTCAATGTAC TCTGCGATGA CAGTTTGACA TCAGAAACCA ATGCATCAGA AGGCAAGGAG AAGATGATAC TACTGGATAC GAAACTTGAG AAGAAACCTG ATCCTATAAT TGTAAAGCCT CCAAATGCTG TTCCATTTTC TGATGAGTGG TTAGCTGCAA TTGAGGCTGC TGGGGGGGAA ATCTTAACAC TGAAAAGTGG ACGTGTGCAA CATTCACCAA CCGAGAAATC TGCTCCTGAA CCAGGTCCTT GGTCTCCGGT CAAGAAGAAG AGCAATCAAG TTGTAGGGCC ATTTGACTGT ACAAAGTATA ATAACAAAGG TCTTCCTCCT GCTTTTGACT GAAGAAAACT AGGTTTCTTC TA 
Length3582
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18231033.. 18236212
Download Sequence
A.thaliana
AGI-codeAT5G60150.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg477561
21.8174 Ahg944901 SET domain group 4
22.891 Ahg494222 Pectin lyase-like superfamily protein
24.6577 Ahg485479 Tetratricopeptide repeat (TPR)-like superfamily protein
27.9285 Ahg945129 RHO-related protein from plants 9
28.1425 Ahg492529 Disease resistance protein (TIR-NBS class)
31.6544 Ahg478830 Plant protein of unknown function (DUF936)
32.1248 Ahg491553 early nodulin-like protein 15
32.311 Ahg944465 AP2/B3-like transcriptional factor family protein
34.8568 Ahg893998
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression