Detail


ID : Ahg952040

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952040|scaffold_32500001.1
Sequence
ATCATCCTGT CTGGGGTAAA ATGGACAGCT ATGCAGTGGG AAAGGAGAAG AGGAAGCAAC TGCTTCTGAT TCTTTGCCAA CATGAATCTG ATAGGCTTGA TGTTTGGGCA CAACCTATTA GTTCAAAGAA CAGTCCTCCA TATTCACGGC TAAAAATAAG CTCTGGGAAA TGGACTGAAC ATGCTAAAAC TGCCTTTTCA GTGGATCCAA GGATTGCTCT ATCATTAGCT TCAAGATTTC CAGCAAATAT TGCTGTGAAA TCCCAAGTCA CTCAGCTAGT TCAGGCTCAT ATAGTAGATC TTCGTACAAT TCCTGAGGCG TTGCCATATT TTGTCACACC TAAAAGCGTT GAAGAGAACT CAGTGCTGTT GCGACAGCTG CCTCATTGGG CTGCTTGTTC AATTACACAG GCTCTTGAGT TCCTCACTCC TACTTATAAG GGACATCCTC GTGTCATGGC ATATGTCCTG CGAGTTTTAG AGTCCTACCC CCCTGAGCGA GTCACTTTCT TCATGCCACA GTTAGTGCAG TCTCTGCGCT ATGATGAAGG GAGGCTGGTT GAAGGGTATC TTCTTAGAGC TACCCAAAGA AGTGACATAT TTGCTCATAT CCTCACGTGG CATTTGCAGG GTGAGTCTGT TCAGGAAACT GTGAAAGATG GTGCTTTCGA TAAGAATACA TCATTCCAAG CAATCTTGTC AGAGGTTCGA CAGCATATCA TTGATGGTTT TAGTCCAAAG GCCTTGGACA TGTTCAAAAG AGAGTTTGAC TTCTTTGAAA AGGTTACATC TATTTCTGGG GCATTGTTTC CTCTTCCAAA GGAAGAACGA AGAGCTGGTA TCAGGAGGGA GTTGGAGAAA ATCAAAATGC AAGGAGAAGA CCTTTATTTG CCTACGGCTC CTAACAAGCT TGTTAAGGGT ATCCAGATAG ACAGTGGCAT AACCCTTCAA TCAGCTGCCA AAGTCCCTAT CATGATAACC TTTAACGTTG TTGATCGTGA TGGTAACCAG AATGATGCGA AACCACAGGC TTGTATTTTC AAGGTTGGAG ATGATTGCCG TCAAGATGTT CTTGCCCTTC AAGTGATATC GCTTCTTAGA GACATATTTC AAGCGGTTGG TCTTAATCTT TATCTTTTTC CTTATGGAGT ACTTCCAACT GGGGCAGGGA GGGGGATAAT CGAGGTAGTG CCAAATACAC GAAGCAGAAG TCAAATGGGT GAATCAACCG ATGGTGGCTT GTATGAGATC TTTCAAGAGG AGTTTGGACC CGTTGGCTCA CCCTCCTTTG AAACGGCAAG GGGTAACTTC CTCACCAGCA GTGCTGGTTA CGCGGTGGCG AGTCTTTTAC TCCAGTCCAA AGACAGACAC AACGGCAATC TCCTCTACGA CAACATGGGA AGGCTTGTTC ACATTGATTT TGGTTTCATT TTTGAAACCT CCCCTGGTGG AAACATGCGT TTTGAGAGCG CACATTTCAA ACTGAGCCAC GAAATGACAC AGTTGCTTGA TCCATCAGGG AATATGAAGA GCGAATCTTG GCATCAGTTT GTGAGCTTGT GCGTGAAGGG TTACTTGGCT GCTCGCCGGT ACATGGAGGG GATCATCAGT ACAGTGGAAA TGATGGTGGA AAGTGGATTG CCTTGCTTCA GCAGAGGAGA TCCAATTGAG AAACTTCGCA AGAGATTTCA TCCCGAGATG AGTGAGCGTG AAGCCGCACA CTTCATGATC CATGTCTGTA CCGATGCCTA CAACAAATGG ACCACGTATG GGTACGACTT GATACAGTAT CTGCAACAAG GCATCGAGAA ATAAACGCCA GAGATGTTAC ATAT
Length1834
Protein Sequence
Protein Residue
Map Locationscaffold_325: 262.. 3903
Download Sequence
A.thaliana
AGI-codeAT1G49340.2
DescriptionPhosphatidylinositol 3- and 4-kinase family protein
TAIR curator summaryEncodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.
Alias[ATPI4K ALPHA]
Gene coexpression
MR
MR Locus Description
21.8861 Ahg495277 transposable element gene
54.3139 Ahg949080
84.8292 Ahg936680 basic helix-loop-helix (bHLH) DNA-binding family protein
84.947 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression