| Annotation |
|---|
| Description | Red_clover_cryptic_virus_1|plants|dsRNA |
| Sequence |
CAGCTGCTCT ACCTCAACTT AATACCTACT CTAAATGGAT TACTTCATAT CCGCATTTAA CCGAATCACA CATTGGTTTA CCACTCCTAC CAACTTCGAA TACGTCGGGA ACTACTCACT ACCCCCCGGC CTTCTCCGTG TCAATGACGT TGCAATTGCA AATCATAAAA AGACATTGGA ACACTCATTC AACAAGTATC TTTACAGTCA TGAGATTAAA CTCATCACTA AGGAATATCG TCGCTCGCCT ATAGACGAAG ACTCTATACT CGAAGACTTT TTCTCTGGAG ACTTTGAATA TTTCGAAATC CCTTTCGACT ATCACGTCGA ATATGGGATC CAATGCATGG CTGACGCCTT TCGTCCGCCT AGACTTTGCC GACCAGTTCA CATATTAGAT GTGAAACATG GATACCCTTA CAAATGGAAC GTCAATGCTG AACCACCCTT CTCCACTGAT GAATATTTCC TCTCACAACG TAAGACTTTT GGCGAATTCA TTCGTATGCA TGAATATGAA CACATTGATA AAGATGACTT CTTTCGACGT CACCCTAACT CTGAATCCCA TGATCTCCTC CGCACCATAG TCCCTCCGAA ATTTGGCTAC TTAAAGTCAA TGATATTCTC ATGGACCCGC CGCTGGCATC ATATTATCAA ATCTGGATTT ACAGAATCTA CTGGCCTTGA AACTAATGGT TACTTCTATA ACCGATTCAT CTTTCCCATG CTCCTACACA CCAAGACTGC AATAGTCAAG AAAAACGACC CTAACAAGAT GCGCACCATA TGGGGCGCTT CCAAACCATG GATCATCGCT GAAACGATGC TCTACTGGGA ATACATAGCC TGGGTTAAAC TCAATCCCGG CGTCACACCG ATGCTTTGGG GTTACGAAAC CTTCACAGGT GGATGGTTCC GACTGAACAA TGAACTGTTC TGCGGACTAA TCAAGAAATC GTTTCTAACT TTGGACTGGT CCCGTTTCGA CAAACGTGCC TATTTTCCAC TGTTACGTAA AATCTTGCAC ACCACCAGGA CTTTCCTCAC TTTTGACGAA GGATACGTCC CAACATTTGC AGCTCCCACC CACCCGCAGT GGAATCAAGA AAAAGCCCAC AGACTTGACC GTCTATGGAT CTGGACACTC GAAAATTTAT TTGAGGCTCC GATCATCTTA CCTGATGGCC GCATGTATAA ACGACACTTT GCTGGAATAC CTTCTGGCCT GTTTATCACA CAACTCTTAG ATTCTTGGTA TAATTACACC ATGCTCGCTA CCATCCTGAG CGCGCTTCAC TTCGACCCTA AGCACTGTAT TATCAAAGTT CAAGGCGATG ATTCTATCCT CCGCTTGACC ACTTTAATAC CTGTCGACCA ACATGCAAAC TTCATGTCTC ATGTCGTCAG ATTAGCGTCA CATTATTTCA ATTCTATTGT TAATGTCAAG AAATCTGAAG TAGCTAATAC ACTCAATGGC CGCGAAGTAC TTTCCTACCG AAACCACAAC GGCCTGCCTC ACCGTGATGA GATCACCATG CTTGCCCAGT TTTACCACAC TAAAGCAAGA GATCCAACAC CTGAGATAAC CATGGCCCAA GCAATTGGTT TCGCTTACGC AAGTTGTGCT AACCACAATC GCGTTTTATG GGTACTACAC GACATATACA ACTACTATCA CGATCTCGGA TACCGACCAA ATCGAGCCGG ACTCACTCTA ACATTTGGTG ATTCCCCCGA CTTGTTTGTT CCTGAAATAT CCCTTGATCA TTTTCCGACA AAATCAGAAA TTAGACGTTA TCTTACAGCT CTACACTATC AAAATGAAGC TCAAAACGCC CGGACCTGGC CTCGTACATT GTTCATCAAT GCACCTGGCG AGTAAAAGCC GATCGCTTTG TTTGTTTCTT TAAATTAATT AAAAAAAAAA AAAAAACAAC TGCTCTACCT CAACTTTTTA CTTACTCTAC CGCTTTAACA AGCCGCTCGA TAACCATGAA TCACAACACT CCTCCTGCTG ACGCCAATGG CCCTGCCCTT CCTGAAGGCT CCGTCCCTCC CCCTAACCCT CCTACTCACA TCCCTGTAGC CCCTGCTGCT CCTGGCGCCG TCCAAACGCC GCCTGCTCCC CCTGCCCGTC GCAATCGCCA ACCCCATGGC CCTGTGCCCG CTGCCAGCAA CCACCATGCT CCTGGAGCTC CTGCTCTCCT CGAACTCTCC GCTGCCTACC CGATGTATAC TGAACAACGT CGTGGTGTTA ACTTCTTTGT CCCTGACTCC CAAATGCTCT TTCACGTTTT GGGTATGTGT GACCAAATGA TGAACTCTAC TGACCGATTT CTTAGGTCCT CCCCTGCTTG GCTCCCTATC GTCTCCCAGC TTTACATAGC TGTTCTCTGG AATGTTATGA TCTGCCGTGT TTACATAAAC ACTGGCTATG CTAGCCATCT AGCTCCCATC ATCGATGTTC TCATCTCTCA TCTGCAAATC CATGAATGCA TGATCCCTGG ACCTTTAGTT CCTTTCTTTC AATCCCTTGC TGCCGTAAAT GGCCCTTTTG ACTGGATAGG TGACATTACT CCTGCCATGC CTGCTTTTGC AAGTCTCTGG AATGCTGAAC AATTTACCGC TCGAGATAGT TATGCTCGTC AAATCCCCAT ACCTGCCATT ATTCTCGATC AACTTCACCA CTTTGCCACC CGTGCTATTG TAGCCGGAGT TGCCAATTAT GGTACTTTTG AATGGTATAG AAGCATTTTC AACCGTGGTG TTGGTGCAAC CCCCGCCAAC TCAAGACTTG GACCACAACT TTGTGGCTCC CTTTTCACCA CTAATGCTCA ATTCGATGCC GCTCGTGCTT TTTGGAACTC TGCCCTTGCT TCTGGTATTA CCCGTACTGA TGCCGCTCGT CCCCCGCTCG TCAATTACGC TCAGTTGCTT GGCTTCCAAG CCCAAGATGG TTCAGACCAA CTCAATTGGT TTCAGTTTAC TTCTTCAGTG ATGCAAACTT ACTGCCAATA CTTCAATGGT TCTGTGCCTC TCAAATCTAT CTCCCTCACT GGTATAGGTG CTGTCGTTAC CTACGGAATC CCCGTTAACA ACGTAGCCAC CCGAAACTGG TTTTATCCTA CTGCTGCTAT GATCGAACCT TTCGCCACAT CCCGCTATGC TCCCCGCCGT GAAATACCAA ATCAACTTGC TGTCAAATTT CAACATGCTG ACCACGAGGT CGAAGAACAA GCCGAACAAT ATGCGATTCT CACCCACACT AACATTAAGT GGTACGAATC GCTTATCACC CAGAATGCGT TAACTGCCGT CACCGGTAAC CTCGTCCACC AAGGCGACTA CTGGCGTATG ATGCCGTTCC GCTATTCTAG TCCCATCAGC CTTAAGGTGC AATATGCTCA AATTATTGCC TCTCGCTACC ACCAGCTTGC TGCCAACCGT GCTGAATAGA CCTCTGACCC TGATGTCAAC AAACTCACTT TTTGCTGTCC TTAACCGATA GTCATTCTGA TCAGATTGGA TTTTTTTGTT TTGAATTTAA CTTTCTTTAA CTTTATCTTT TCCTTCTCTG TCTTTTCTTT CCGCCCTTGC GGGAAAAAAA AAACAAAAAA AAAAAAAAGA AAAAAAAAAA AAAAAA |
| Length | 3646 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg907080 | Aldolase-type TIM barrel family protein |
| 2.23607 |
Ahg481786 | |
| 2.44949 |
Ahg913407 | |
| 2.64575 |
Ahg948553 | Protein of unknown function (DUF581) |
| 3 |
Ahg472227 | damaged DNA binding;DNA-directed DNA polymerases |
| 3.4641 |
Ahg887747 | |
| 3.87298 |
Ahg497249 | Nodulin MtN3 family protein |
| 4.69042 |
Ahg315116 | Nucleotide excision repair, TFIIH, subunit TTDA |
| 7.34847 |
Ahg887626 | |
| 8.83176 |
Ahg342622 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|