Detail



ID : Ahg472227

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472227|fgenesh2_kg.1__2181__AT4G31400.1
Sequence
AAACACAAAC CTAAGAAAGA TTCGAGCTCT CTCTGTACGA TGCAAGCCAA AATCAATTCT TTCTTCATCT TCTATCTCTT CCCCACTGTC TGGGAGAACA ATCGGAACGC CATCGTCAAC ACCTATGAGC GTCGATCTGC GATACCCGAT AGAAGTCAAG TGCTTAAGGG ATGCATCGGG AAGCCGCTGA AGAAAGGATC TTCTTCTGTA CCTAAAAATC TCAAAAAGAA GCGCAATTAT ACGCAATTCC ACTTAGAGTT GGGCCAATCT GATTTTCTTC TCAGACATTG CGCACAATGT GGAGCTAAGT ATGCTCCTGG AGATGAATTA GATGAGAAGA ACCATCAAAG TTTTCACAAG GACTATATGT ATGGAATCCC TTTTAAGGGT TGGCAGAACG AGAACCGCAT CATTATGGTA TCAGAAAATG ATTCCCCTGC ACACAGGAAC AAGGTTGTGA AAATGATGGA GGTTGAGTTA GGTGAGGATT GGATTCTTCA CCAACATTGT AAGTATTTTG ATGTCTACTA TGTTGAGCCA ATTGGTTTAT CTATTCATAT CCACTCAGAG GATCTCCGGA TGTCTTGTCG AGCATCAAAT GATAGATTAG ATTACGGAGC GATTGTATGT GAAGAAGAAG CTAAACCAGA TGTTTGTGGG ATTAGAGCGA TTTGGGCCTC ACCTTCTAAC AGAAGAAAAG GCATAGCCAC ATGGTTACTC GATACCACGA GGGAAAGCTT TTGCAACAAT GGGTGCATGT TGGAGAAATC TCAGTTAGCA TTTTCACAAC CAAGCACCAT GGGAAGATCT TTTGGATCTA ATTATTTTGG AACTTGTTCA TTCTTAGTTT ACAAAGCTCA GCTAATTGAT ACTCACTTTT CTTAACGGCA TACATTTTAT CACATCACAA CCATCATCTT CACTGTTACT CTT 
Length933
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8133935.. 8135706
Download Sequence
A.thaliana
AGI-codeAT4G31400.1
Descriptiondamaged DNA binding;DNA-directed DNA polymerases
TAIR curator summaryEncodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.
Alias[AtCTF7][CTF7][ECO1][CHROMOSOME TRANSMISSION FIDELITY 7]
Gene coexpression
MR
MR Locus Description
3 Virus2150
5.47723 Ahg319913 Protein of unknown function (DUF626)
9.48683 Ahg890521
10.4881 Ahg315116 Nucleotide excision repair, TFIIH, subunit TTDA
11.3137 Ahg934496
11.3578 Virus1014
11.8322 Virus1056
13.2665 Virus1615
16.6132 Ahg936698
31.273 Ahg929694
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression