Detail



ID : Virus2153

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionRhizoctonia_solani_dsRNA_virus_2|plants|dsRNA
Sequence
CCGAATTCCC GGGATCCGAA GCATCGCTAT TCAGCTTTGT TGTAATATCA AGCAAAGTTA TCACATAAAT CGATCTTACC TCTCCTCAAT GAATTTGTAC AACCGTGTCT CCGCACTTTT TGCAAACTGG TTTTCTTCAC CGTCAAATCT CGAGTTTGTC GGCTCCTACC ATCACCAACC GGGAACGGTC CCACCGAACC CCTCCACGCA AGAAGCTCAC AAACGCTTTC TACACAATGT ATTCAAGCAG CACCTCTTCA CTTACGAACT CGATTATATC GAGAATGAAC ACCGCCGCTC TGAAGCTACA CCCGAAGCGA TTGAAAATGA CTTTTTCGCC AATGATGTTG AGCCCCATGA CATACCGTTC GACGTTCACG TTGAAATTGG TTTACAATGC ATGACCGACG CGTTCCGCCC TCCTGTTCCT TGCCTCCCCG CACATCTCAA CGATGTCGAA CATCACTACC CATTTAAATG GCAAGTCAAC GCAGAACCTC CGTTTTCAAC AGATTCTTAT TTCCTCGACA ATCGCAAATT GTTCAGCGAC TACTACGACA CCGAGTCTCA AACTTGGCGT GGTTACGTTG ACCCGTTTGA AGCCAATCGT CGATATCAGC ACACTAAAGA CAAGGAAGGT TTCCTCAACC AAACCGTCCC TGCCAAGTTC GGCTTTATGA AGGACACAAT CTTCAGCTGG ACCCGCCGCT GGCATCACAT CATCAAAGAA GGCTTTCAAA CCGCTACGAA TTTGTCATCT ACCGCATACT TACGCGATAG ATTTATCTTT CCTATGTTAT TGCATACTAA AACAGCAATC GTCAAAAAGG ACGACCCCGA CAAGATGCGC ACCATCTGGG GCTGCAGCAA ACCATGGATC ATCGCTGACA CGATGTTCTA TTGGGAATAC ATAGCTTGGA TCAAAAAGCA CCCTGGCGTC ACACCGATGC TCTGGGGTTA CGAAACCATG ACTGGTGGAT GGATGCGACT CAACTCGCAA CTGTTCTCAT CGTACCTCAA GAAGTCTTAC GTCACCCTCG ACTGGTCACG CTTCGACAAA CGTGCTTATT TCAAACTCAT CCTCGCTATC ATGTGCCGCG TTCGTACCTT CCTCGACTTC GACAATGGCT ACCTCCCGAA TGTCAACTAT CCTGACACTC GTACCGACTG GTCTCCAAAC AAGGCCCAAA GACTTGAACG TCTCTGGCTC TGGACCCTCG AATGCCTAAT CAAGTCTCCA ATCGTTCTAC CAGACGGTAG AATGTATATA CGACACTATG CTGGTATACC TTCCGGACTA TTCATCACTC AACTTCTGGA CTCATGGTAT AACTACACTA TGATATGCAC TATCCTTTCT TCCATCGGAC TGAACCCTAA ACACTGTATC ATCAAGGTAC AAGGCGACGA TTCAATCGTC CGCTTAGGCG TTCTTATTCC ACCTGAGGCT CACGAAGCCT TTTTGCTCGC ATTGCAATCT AAAGCAGATT TCTACTTCAA AGCGATCATA TCAGTGGACA AATCCGAATT GGGCAACTCT CTCAACAATC GAGAAGTCTT GTCTTATCGC AACTACAACG GTTTACCCCG TCGCGATGAA ATCAAGATGT TAGCTCAATT TTATCACACG AAAGCACGCA ACCCTACGCC CGAAATCGCA ATGGCTCAAG CCGTTGGATT CGCGTACGCT AGTTGTGGCA CGCATCAACG CGTTCTCGAT GCACTCGAGC ACGTCTATAC TGACTACAAA GATGCTGGCT ACACGCCTAA CCGCGCTGGA CTGTCTCTGG TGTTTGGCAA TTCGCCTGAC ATTCAACTTC CACACTACGA TATCGATCAC TTCCCATCAA TAGAAGAGAT CAAGCGCTTC CTGACATGCA ACTCTTACGA TAATAGCGTT CAGATGGCCA AATCCTGGCC CACTTCCTAT TTCATTTCTG AACCCTGTGA GAGAATGTGA GTCGTGAGCA CTTTTATTTT ATTTATTAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA CCGAATTCCC GGGATCCGAA GCATCGCTAC TCAGCCGTGT TGTAATACCA AGCACAGTTA TCACGTAAAT CGATCTTACC TCTTCCACAG CAATTTGAGA CCACACCATG TCCGCTAAAA CGGATCAAGT TTCAGTCAGC GCTCCCGACG CCGCTCCTGG CAATCCTCAG ACCCCCACTG CCGCCGCCGT CCCTACCGCA CCGTCCGCTA ACCCCGAACC TGCGTCTAAA AGCTCGACGA AATCCAAAGG TGTTCGCAAG ACTCTCGCTT TCTCGTCTTC GTCTCCTGGA ATCGCTCCAC TCCTCAACAG CATCGCAAAC GTCAATGTCT CGATCCCTCA ACGTAATCAG ACAAATTTCT TCTTCCCTGA CGCTACTTGC TTCATGCGTT GTGTATCCAC ATGCGACCAG GCTATGTCTA CGACCAAGAA GTTCCTCGAC GGAACAGAAT CTTGGACAGC ATTTGTCTCT CAGTACTACG CGTCCCTTCT CTGGCACCTC CAGGTTTTTA GGACCTACGC TAAATCCGGC ATCCCCGATC AAGAAGGACA AGAATTTCTT GACTTTTTCG AAAAGCGTAT CGATCTCCTG AACATCCCAG TTCCAGGCCC ATGGATTCCT TTCCTCCGCT CGCCCTCTGT AGTTGAAGCA CACCATGAAT CTTACGGCAA TATCGCTCCC GTACTTCCCG CAATCGCGAC CACTCCTCTC AATTCCGCTA ACTTTTTCAG CTGGCCACCA GTCGTCAGCC GCTCGATTCC AAACCCACTC CTGCCACTCG ATCAGCTTCA TGCTCTCGCA GGACATGCTA TGGGCCAAAA CAACGCTAAC GCGTTTGTTG CCTATACCAA TATTATGGGA ATGCAACTCA TCGGCGCTAA TGACTTTAAC AATGTCGCCT CGCTGTTACT CAACCCGACT TCTCACAGTT GGTCGTCCGC CTCCCGCAAC CGAACCGCTA CCGTCGCAGA ATTTTGGCAC GACCATGCCA ACATGCTCCC GACTCGTTTG GTCCACAACC AGGCCGCCAA CCAAGAAATC AATACGTACT TCAGGTACTT TGGGTTCGAG TCTGTAGATG GCACACACCC TCACGGAATG CTCGAAACCG TCTTGAATGA TATGGCACTA TACTGCCAGT TTTTCAAAGG TTCCGCTCCC TTCTCCACCG TCGACATCGT CGGCTTAGGA GCTTCCATTC CTCGCCACCT GCCAATTTCC ACTACGGCAG TCCGCGCATT CGTGTACCCT ACAATCAATC GGCTTAGAGC TAACCGGCAT GCTCAAGGAC ACCGTCACTT TCCAAGTGAC CTACTCTACA ACATGTCTCA CGGTGACCTC ACGCTCGATA CCGTTGGTGA ACAATATGCA ATGTCAACAT TGGTGAACTC CACCTTTGGC AGCATCCTCA CCCAAAACGG TCATGACCAG ATTCCTCTCG ACGATCAAGT TGAAGGCCCT TTTTGGGCTA TCACAACCAT GCGTCACGCA AAAGGATTCT CGCCAATTCC GAGCTTCTCA ACCGTCATCC CGGCATACTA CCATGTCACG ACCCCGGTAA CGCCTAAGAC TAGCTAATTT CTTTTTTTTT CATTCTATTT GTATGATGAT GTACTCTAGT TTTGAATCTG AATCGCTAAC CCCCACTCTG TTTCTATTCC TCGTTTTCTC TTTCTCAGCG AAAAGATATA AAACTGTCTC TTCCAAGATA GTACACTGCT TGTAACCATT CAAGCTCGAC TATTGAAGAA TTGTACAACC AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA CTCGGATCCC GGGAATTCGG 
Length3830
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg917508 cyclic nucleotide gated channel 5
2 Ahg326968 Major facilitator superfamily protein
4.24264 Ahg887377 Glutamine amidotransferase type 1 family protein
4.58258 Ahg917732 RNA-binding (RRM/RBD/RNP motifs) family protein
4.89898 Virus3260
5.65685 Virus1902
6.7082 Virus3144
9.79796 Virus3873
10.9545 Ahg923150 nodulin MtN21 /EamA-like transporter family protein
16.5227 Ahg948650
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression