Detail



ID : Virus3049

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionCarnation_mottle_virus|plants|ssRNA
Sequence
GGGTAAGCTG GCGGGCAAAC CTACACTCTA TCTTACATAC ATTATATATT CTAACCATCT GCTTTCACTA TGGGATTACC CAGTCTACTA GTGGAAGGCG TTATTGGATG CACTCTAGTT GGTGGTTTGG TGGCTGTTGG TAGCGCAGCG CTGGCCGTTC GGGCGACCAT CGGTGTAGTG GAATTCAATA GGGAGTGTGT GCGCGGGGCG AGAAGGATCG TATCTAGCGG AGGGAGGTGC TTAGTAGTCC AATCCCCTTA TGGCAATCCT AACCAAGGAT TGATAAGGGG TGAAGACGAA GAAATTGATA ACGTGGAGGA GTCAACTCCG GTAGAGTTGA CTCCGTTGAT CGAGGTTAAG GCGGAAGTGG ATGGGAAAGA GGTGGTTGTC TCTAAGAAGC GCGTGGTAAA CAGGCACTTG AGACAACGAT TCGTTCGCTC CATAGCCATC GAAGCCAAAA ACCACTTTGG CGGTGATATC AGCCCAAGCA AGGCCAATTA CCTTTCTGTT TCCAAGTTTC TAACGGGGAA ATGCAAGGAG AGGCATGTTG TGCCCGCTCA CACAAGAGAC TGTGTGAGCG CTGCCATGGT GCTGGTGTTC ACCCCTGACG TCCACGAGAT CAGAATGATG GCAGGATTGG CGTCTGACGC AGCGTACGGA ATAAAGATCG CGATGGCAAG CATACTGAAC AGGAAAGGGT GGTGTTGGAG GCTAATGGTA AATCCATTAG ATAGGGCAAG ATGGTGGGAA ATGTGGTGCG TTGTGAACGG GTTTGACTCC AACAAACCCG TCACCTTTCC CAAATAGGGG GGCCTGTTCT ACCTCAATGG TGTGGAGACG AAAATTCGTC GTGGAGGCCA CCCATCAGTG ATTGAGGTAG ACGGGCAATG TCCTCTAAAA GAGAGAAAAC TCTACGTACA GAATGCCATA ACCACTGGTT ATGAATACAG GGTCCACAAC CATTCGTACG CAAACCTCAG ACGAGGGCTC CTTGAGAGAG TTTTCTATGT TGAGCGCAAC AAGGAGCTAG TCAGCTGTCC GCAACCTGAA CCCGGCAGCT TTAAAGAGAT GGGATACCTG CGACGCAGGT TCCATAGAGT GTGTGGCAAT CATACCCGGA TCTCTGCCAA TGATTTGGTA GATTGTTATC AGGGCAGGAA ACGCACAATT TATGAGAATG CAGCAGCGTC CCTACTTGAT AGAGCTATCG AAAGGAAGGA TGGCGATCTC AAGACCTTTA TTAAGGCAGA GAAATTCAAC GTAAATCTGA AAAGTGATCC TGCTCCTCGG GTTATACAGC CTAGGAGCCC TCGCTACAAT GTGGAGTTGG GCCGGTACTT AAAGAAGTAT GAACACCATG CTTACAAAGC CTTAGACAAG ATCTGGGGAG GACCAACAGT CATGAAAGGA TACACTACAG AGGAGGTAGC ACAGCACATT TGGAGCGCAT GGAATCAATT CCAGACACCT GTAGCCATAG GATTTGACAT GTCAAGATTC GATCAGCATG TGTCTGTAGC CGCGCTCGAG TTCGAACATT CATGCTATTT GGCCTGTTTT GAAGGGGACG CTCATCTCGC CAACTTGCTT AAGATGCAAC TGGTGAATCA TGGCGTGGGT TTTGCGAGCA ATGGAATGTT GCGATACACA AAGGAAGGGT GCAGAATGAG CGGTGACATG AACACTGCCT TGGGCAACTG CTTGTTAGCT TGCCTTATCA CCAAACACTT AATGAAAATC AGGAGCAGAC TGATCAACAA TGGGGATGAC TGTGTGCTTA TTTGCGAAAG AACAGACATC GACTACGTCG TGAGTAATTT AACGACGGGA TGGAGTCGAT TTGGATTCAA TTGCATAGCA GAAGAGCCAG TGTACGAAAT GGAAAAGATC AGATTCTGCC AGATGGCACC GGTGTTTGAT GGAGCAGGCT GGCTGATGGT CAGGGACCCT TTGGTGAGCA TGAGCAAGGA TTCTCACTCC TTAGTGCATT GGAACAACGA AACGAATGCA AAACAATGGC TGAAGTCAGT AGGAATGTGC GGTCTGCGGA TTGCCGGGGG GGTTCCAGTT GTGCAAGAGT TCTACCAAAA ATACGTTGAA ACAGCCGGAA ATGTGAGAGA GAACAAAAAT ATCACAGAGA AGAGTAGTTC TGGGTTCTTT ATGATGGCGG ATCGCGCTAA GCGGGGCTAT TCTGCTGTGT CTGAGGTGTG CCGATTTAGC TTCTACCAGG CATTCGGCAT CACGCCAGAC CAGCAGATCG CGTTGGAGGG TGAGATCAGG TCTCTCACTA TCAACACCAA CGTGGGGCCC CAGTGTGAAG CGGCAGATTC ACTATGGATA TTGAATCGGA AGTACCAGTA GTTGGAAAGC AAATGCTCGC TGGGAATAGA GGAAAACAAA AGACACGTAG ATCGGTGGCC AAGGATGCCA TCCGCAAACC TGCATCTGAT AGTACTAACG GGGGTAATTG GGTTAATGTT GCTGATAAGA TTGAGGTGCA CATTCACTTC AACTTTTAGT TTGCCCCCAC TGGTAACTTT AAATCAGATA ATAGCGTTGT CATTTTGTGG TCTTCTATTA AACAGCATCT CTCGGGCAGA AAGAGCTTGC TATTACAACT ACTCTGTTGA TAGTTCTAAA CAACAACACA TTTCAATAAG TACACCAAAT GGAAAATAAA GGAGAAAAGA TCGCGATGAA TCCCACTGTG CAAACATTGG CGCAGAAGGG GGACAAGTTA GCCGTGAAGT TGGTGACAAG AGGGTGGGCC TCTCTGAGTA CGAACCAGAA GAGGAGAGCT GAAATGCTTG CTGGATACAC TCCAGCGATC CTAGCCTTCA CACCCCGACG ACCACGGATG ACGAACCCTC CTCCAAGAAC CAGTAGGAAT TCACCAGGAC AAGCTGGAAA GTCCATGACG ATGAGTAAGA CCGAACTATT AAGCACCGTC AAAGGTACCA CGGGTGTTAT CCCAAGCTTT GAAGACTGGG TCGTTTCCCC CCGAAACGTA GCCGTCTTCC CTCAACTCTC GCTGCTGGCG ACGAACTTCA ACAAGTACCG CATTACTGCG CTCACTGTGA AGTACTCACC CGCGTGCAGC TTCGAGACCA ATGGGAGGGT GGCTCTGGGA TTCAACGATG ACGCTTCGGA CACACCACCA ACCACCAAGG TTGGATTTTA CGATCTGGGC AAACATGTGG AAACTGCTGC ACAGACAGCT AAGGATCTAG TGATACCAGT AGACGGCAAA ACCCGGTTCA TCAGGGACTC GGCTAGTGAT GATGCCAAAC TAGTCGATTT TGGACGAATA GTCTTGTCAA CATACGGGTT TGACAAGGCT GACACTGTGG TGGGCGAATT GTTTATACAG TACACGATTG TGCTGAGTGA CCCAACCAAG ACGGCCAAAA TTTCACAGGC AAGCAACGAT AAGGTGTCGG ACGGACCAAC GTATGTGGTC CCTTCGGTTA ATGGCAACGA GCTACAACTA AGAGTGGTAG CCGCTGGGAA ATGGTGCATT ATAGTGCGGG GTACGGTTGA GGGAGGCTTC ACCAAACCCA CACTTATTGG GCCGGGAATC AGCGGTGATG TGGACTATGA AAGTGCCAGA CCTATCGCCG TTTGTGAATT GGTGACACAA ATGGAGGGCC AGATATTGAA AATCACCAAG ACCTCAGCAG AACAACCACT CCAATGGGTT GTTTATAGGA TGTGAATGCA ATAGAAAAGT TTGTTAGACA CACACGGCGG GACGTGTTGC CGGAGCTGCC ACTCCGCCCA AGATGGATCG ATATTAACCA TCTTTGGCAA CAGCGTGCGT GGCTAATCGA ACCTAGTAAT TGCATAGCAT CCGACTGTAA CCTGTTCTCT GCTGAATACG AGGGTGGCCT CGTGATCCCA AACCATAAAA GAAACCAACT TGTTGGTGGA AGGGCTTGGA AGTAGGATCA ACCACTGTTT ATTAATTAGG GGTGAGAGTA TTCACTGTAC TCTTTCCCCG CCC 
Length4003
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus2944
1.41421 Ahg898669
1.73205 Ahg890982 transposable element gene
2.23607 Ahg937247 Major facilitator superfamily protein
2.44949 Ahg911288 PLANT CADMIUM RESISTANCE 2
4 Ahg899609
5.47723 Ahg945291 Heavy metal transport/detoxification superfamily protein
6 Ahg907131
6.9282 Ahg927248 nine-cis-epoxycarotenoid dioxygenase 9
7.07107 Ahg897660
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression