Detail



ID : Ahg927248

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927248|scaffold_202809.1
Sequence
CAAGTTAATC TCGAAGCCGG TATGGTAAAC CGGAATTTAT TAGGTAAAAA AACACGGTTT GCTTATTTGG CTTTAACCGA ACCGTGGCCT AAAGTGTCCG GTTTCGTTAA AGTGGACTTA TCGACCGGAG ATATTCAAAA GTATATATAT GGAGATGGGA AATACGGAGG AGAGCCTCTG TTTCTGCCTT CCGGTGACGG TGAAGAAGAC GGTGGTTACA TTATGGTGTT CGTTCACGAC GAGGAGAAGG TGAAATCGGA ACTCCAAATC ATAAACGCCG TTAATATGAA GCTTGAAGCT ACCGTTACGC TTCCGTCGAG AGTGCCTTAT GGTTTCCACG GAACGTTCAT CAGTAAGGAA GATTTATCGA AGCAAGCTTT GTGTTAATTT TAGTTATGCG TATATACT 
Length408
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17141762.. 17142169
Download Sequence
A.thaliana
AGI-codeAT1G78390.1
Descriptionnine-cis-epoxycarotenoid dioxygenase 9
TAIR curator summaryEncodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.
Alias[ATNCED9][NCED9][NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9][nine-cis-epoxycarotenoid dioxygenase 9]
Gene coexpression
MR
MR Locus Description
6.9282 Virus3049
18.3303 Ahg338258 terpene synthase 04
18.9737 Ahg923953 Protein of unknown function (DUF581)
19.3132 Ahg936463 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
21.7945 Virus1221
21.7945 Virus1664
23.3238 Ahg917950
26.5895 Ahg488361
29.7489 Virus1718
36.9459 Virus3925
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression