Detail



ID : Virus3393

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionLettuce_mosaic_virus|plants|ssRNA
Sequence
AAAATAAAAC AACCCAACAC AACTCAAGAA AATTCATACA AACAAACAAA TTCGTATTTT CAAGCAATTC ACTTTCAAGC AATTACAACA TTTTCAATCA CAAATGGCAA CTCTAGACAA CTGCACTCAA GTACACCACA TGTTCGCTTA CAATCGCGAA CACGGAACAA ACTACACGAG GAACCATTTT AGAAGGTACT TAGCAGCCCA GCGAATAGGC TTCTATTATG ATTGGGACGA TGATGTCTAT GAATGTCCAA CGTGTGAAGC TATATACCAT TCTTTGGACG AAATAAAGAA CTGGCATGAG TGCGACCCAC CAGCATTCGA CCTTAACGAC TTCATAACTG ATGCTAGGTT GAAATCAGCA CCAGTTCCAG ATCTCGGACC GGTGATCGTC GAAACCCCAA AAGTGGAGGA AAAACAAGAG CTTAACTTCT TCGCTGCAAC CCCGGCACCT GAAGTGTTAC AGTGGAAATG TAGAGGGTTG CAATTCGGTT CATTTACTGA ACTTGAAACA TCTGAGCCAG TTGTTTCGGC ACCAAAGCCT AATTGTGAAG AGCCGGCTAG GACCATCGCA AAGCCAGAGG AGCCAGTCGA ACAAGAGACC TGTGGAGACG GAAAAAGACT CCTTCAGGCG CAGATGGAAG TCGACAAAGC TGAACAAGAT CTTGCATTCG CTTACCTAAG CGCTAGCCTA AAACCTAGGC TGGAGGGCAG AACTACTGCA ACTATCGCAA GACGCAGGGA TGGATGTTTG GTTTATAAAA CCAAACCAAG CTGGTCGCAG AGGAAGGGAA CAAAGAAGAT CCTTAAGGTT GACACCCTAG CTTGCAAAAA CCCATACATT CCAGCGGTTG TTGACAAGAT TTCAATCGCA GGAGGCTCAT CAGCTAGTGT GATGCACGAA CAACAGAAAC CTAAAATTCT GCACACTACA CCATCAAGAA AAGTGGCCAC GCATTATAAA CGAACGGTGA TGAACCAACA GACACTCACG GCTCTTATAA ATCAAGTTGG CACGATTATA CTAAACGCAG AGAAAGAGTT TGAAGTGGTG GGCTGCAGAA AGCAAAAAGT AACTGGCAAG GGAACTAGAC ACAACGGTGT TAGGCTGGTA AAGCTTAAAA CTGCACATGA GGAAGGGCAT CGGAGAAAAG TAGATATACG CATCCCCAAT GGCCTGCGCT CAATTGTTAC GCGTATTTCA GCTCGGGGCG GTTGGCACAA AACATGGACA GACTCAGAAC TATCCCCAGG ATCTAGCGGA TACGTATTGA ACTCGTCAAA AATCATAGGA GAATTTGGTT TAAGGCGACA CAGTATATTC GTTGTTAGGG GGAGGGTATA TGGTAAAATT ATAGACTCGC AAAGTAAGGT CACACACACC CTCACGCACC GCATGGTTCA ATACAGCGAC GTCGCACGAA ACTTCTGGAA CGGATACTCA ACTTGTTTCA TGCACAACAC CCCAAAGGAC ATACTCCATA CCTGCACATC AGATTTTGAT GTTAAAGATT GCGGCACTGT CGCAGCACTT TTAACTCAAA CACTGTTTCA ATTTGGGAAA ATCACCTGTG GAAAATGCGC AATCGAGTAC AAAAATCTAA CGCGAGATGA GCTTGCCACG CGTGTTAATA AGGAGATCGA TGGAACCATA ATCAGTATTC AAACTCAGCA TCCACGCTTC GTGCATGTAC TCAACTTTCT CAGGTTAATT AAACAAGTGC TCAATGCTAA GAATGGGAAC TTTGGAGCAT TTCAAGAGAC GGAGAGGATA ATTGGGGATC GAATGGATGC ACCTTTCTCA CACGTAAATA AGTTGAATGC TATCGTCATT AAAGGTAATC AAGCAACGTC CGATGAGATG GCACAAGCAT CGAACCATGT CCTCGAAATC GCGCGATATT TCAAGAACCG GACTGAGAAC ATCCAAAAGG GCTCACTAAA GTCATTCAGG AACAAGATCT CCGGTAAGGC ACACTTAAAT CCGAGTCTTA TGTGTGACAA TCAACTTGAT AAGAATGGTG GGTTTGAATG GGGGCAGCGA AGTTACCATG CCAAAAGGTT TTTCGACGGG TACTTCGAAA CCATTGACCC TTCCGATGGC TACAGCAAAT ACACCATAAG ACGCAATCCA AATGGGCATC GAAAGTTGGC AATTGGTAAT TTGATCGTCT CCACAAACTT TGAATCACAT AGAAGAAGTA TGGTTGGAGA ACCAATTGAA GACCCTGGTC TCACTAATCA GTGCGTAAGC AAAGAGGGAG GTGCCTTCAT CTATCCATGC TGCTGTGTGA CAGATGAATA TGGTAAACCA ACATTATCTG AGATCAAAAT GCCCACAAAG CATCATTTAG TCCTAGGAAA TGCCGGTGAC CCCAAATATG TGGATTTACC AAAGGAAGCG GAAGGAAAGA TGTTCGTAGC AAAAGATGGA TATTGTTACA TAAACATTTT CTTGGCTATG CTCGTCGACG TCCCAGAGGA TCAGGCTAAA GATTTCACGA AAATGGCACG CGAGATAGCA GTGAAACAGC TCGGGGAGTG GCCCTCAATG ATGGATGTAG CAACGGCTTG TAATATACTG GCTACATTTC ATCCAGACAC CCGAAGATCG GAATTACCCC GAATCTTAGT CGATCATGCA ACGAAAACAT TTCATGTTAT TGACTCATAT GGTTCAATCA CGACTGGATA TCATATTCTG AAAGCCAATA CCGTGACACA ACTCGTCAAG TTCGCTCATG AATCACTAGA ATCCGAGATG CAACACTACA GAGTCGGGGG GGAACCAGAT AAAGCACCCA GAAAACCAGC TGGCAATGTT CCAACCCTAG GAATTTCAGA CCTCAAGAAC CTTGGAGTGG AATCAGAAAA CGAAGAACAC TCAATCCGAC CAAATCTTCA AAGGTTAATC AAGGCGATCT ACAGACCTCG AATGATGCGC AGCCTCTTAA CAGAGGAACC ATACTTATTA ATCTTAAGTA TTGTATCCCC TGGTGTTCTG ATGGCACTCT ACAACAGTGG TTCCTTGGAG CGGACAATGC ATGAGTTCTT GCAAACTGAT CAGAGACTGA GTGCCACCGC CCAAATCCTA AAACATCTAG CAAAGAAAGT TTCACTCGCA AAGACACTTA CGATCCAGAA CGCTATCTTG GAGGGTGGAG CAGGGTCACT GAATGAAATT CTTGACGCAC CCGCGGGACG ATCCCTATCA TATAGACTAG CGAAGCAGAC AGTGGAGGTG ATGATGGCGC GGAGCGACAT GGACAAGGAA TTGGTGGACG TTGGATTTAG TGTTCTTAGG GATCAGAAGA ATGAACTCAT AGAAAAAAGT TATCTCATGG ATTTGGAGGA CTCGTGGCGC GCATTGCCAT TGTGTGGAAA ATTATCAGCA ATGCGAGTCT CGCGGCGATG GCGGGACACC TCTACTCCCG AAGCAATCCC AACAGGTGCC GCAGATTTGA AAGGCAGATA CAGTATCTCG GTTGGGTCTG TTTCCAAAAG CGCGATCTTG CACCTAAAGG GAATTTGCTC AGGCGCAGTA AAGAGAGTTA AAGACAAGTG GGTCGGAGTG CAAGTGCAAG GCGTGAAATG GTTAGCTAAA TCAGTGCACT ACATGATACC AGAGCTAACG AACATACTGA ACGTTGGAAC CCTCCTCCTA ACACTGATAT CGTTAGGCGT ACGATTCCGG AGTCTGACTG GCCAGTTCAA AGAGATGAAG TATAAAGAGA CGCTAGCAAG GGAGGAGGAA CTACGTAAGC GCATACGCAC CTACAACAGT ACTTATTATG AAATCCACGG AAAGCACGCT GACGCCAAAC AAATCACCAA GTTCATAACG CACCACGATC CAAAACTACT AGAAGTAGTT GAGTTTTACG AAGGTCCTGA AGAGGAAGAA GTAGAGCATC AAGCAAAGCG AGAGGACCAA GCTAATCTCG AACGTATTAT CGCCTTTACA GCTTTAGTGA TGATGATGTT TGATAGTGAG AGGAGTGATT GTGTGTACAG GAGTCTATCA AAGCTTAAAT CATTAGTATC TACGTGCGAT GATGATGTAC GCCACCAGAG CGTTGATGAA ATCATTGACC TGTTCGATGA GAAGAAAGAG ACGATAGATT TCGAGATTGA AGGAAAAGAA CTTTACTCTT CTCGCGTGGT AGACTCGACA TTCAGCAAGT GGTGGGACAA CCAATTGGTG CGAGGCAACA CAATGGCACA CTACAGAACA GAAGGGCACT TCATGACGTT CACTCGTGAA ACAGCTGCGA GTGTGGCAGC CGAAATTGCA CATAACGAGT ATAGAGATAT TCTCTTGCAA GGTGGTGTCG GCTCCGGCAA GTCTACAGGT CTCCCGTTTC ACTTACACAA AAAGGGAGGT GTGTTACTCA TCGAACCAAC TCGTCCGTTA GCTCAAAACG TATACAAGCA ACTTGGAAGT AATCCTTTTC ACTTGTCACC AAATTTGCGC ATGCGAGGTG CTTGCAAATT TGGGTCTAGC CAGGTAACTG TGGCCACGAG TGGTTATGCC TTACACTTCA TAGCGAACAA TGCGCAAAGT CTTAAGATGT TTGACTTCAT CATTTTTGAT GAATGTCACG TGTTAGATGC CAGCGCAATG GCGTTTAGGT GCTTACTGCA GGAGTTCGAA TACCAAGGGA AGATCATAAA GGTGTCAGCT ACACCACCGG GGAGGAAACT TGACTTCAAA CCAATGCACA TGGTCGATAT TACTACAGAA AATGAACTAT CAATACAGCA ATTCGTCCAA GGCCAAGGAA CCGGAGTAAA CTGTGATGCA ACAAAGAAAG GAGACAACAT CTTAGTCTAC GTTTCAAGTT ACAACGAAGT AGACATGTTG AGCAAAATGT TAAATGACAA AGGCTACAAA GTGACAAAGG TTGATGGTAG GACGATGAAA CTAGGGAGCG TGGAAGTAGA AACAGTAGGC ACCCCACAGC GGAAGCACTT TGTAGTGGCA ACCAACATCA TAGAAAATGG CGTTACATTG GACGTCGATG TCGTGGTGGA TTTCGGACAG AAAGTAGTTC CCATCCTTGA TAGTGAGCAC CGAATGATCC GGTATACAAA GAAAAGTATC ACATATGGTG AGCGAATCCA AAGAGTGGGA AGGGTTGGGC GCAACAAAGC TGGTTCAGCC ATTCGGATAG GAAGCACTGA AATGGGGACG GAAGAAATAC CAGCATCAAT CGCAACAGAA GCAGCCTTCT TGTGTTTCAC ATACGGACTT CCTGTCATGA CAAGCAACGT GAGTACAAGC GTACTCGGCA ACTGTACAGT AAGACAGGCA CGGACGATGC AAAAGTTTGA GCTGTCCCCT TTCTTTATGG TCGACCTGGT ACACCACGAC GGTACAGTAC ACCCAGCAAT TAACAGCCTC CTGAGACAGT TCAAGTTGAA AGAATCGGAC ACCAAACTAA GCACGCTGGC AATACCGAAT GCAGTAACCA CATTCTGGAA GAGCGCTCGA GAGTACAACT CCTTAGGAGC CCGCACAACA ATCGATGATG CAGCTAAAAT ACCATTTATG ATCAAGGACG TTCCAGAACA CTTGCAAGAA AAACTTTGGG AAACAATTCA GCAGTACAAG GGCGATGCAG GGTTTGGAAG ATGCACATCA GCCAATGCGT GCAAAATAGC ATACACACTC TCTGTGAGTC CCTTCATGAT CCCAGCAACA ATCAACAAGA TCGACGCCCT AATGGCCGAA GAACGACAAA AGTTGGAATA CTTCCAAACA GTAACAGCCA ACACATGCAC AATCTCAAAC TTCTCCATTA GTAGTCTTGG CGATATGATC AGGTCGAGAT ACTCAACAAA CCATTCTAGA GAAAACCTGC AGAAATTACA AACGGTCAGA GACACAATCA TCAACTTTGA GTGCCAGGCT GGAACTAGTG ATGGGGGTAC CTTCGACATG GAGACAGCAC AGAAATTGGC AGAGGAGTAT GGGTGCATCG ATGTCATTTA TCACCAATCG AAAGGAGCTC TTAGCAAACG ACTCGGTCTC AAAGGCAGGT GGAATCAGAG CCTTATATGC AAAGACCTAT TGATTTTCTG CGGCGTAGCC ATTGGCGGCA CATGGATGAT GTTTCAGAGC TTCAAGGACG GGATGGCTGA CGTAATTCGA CACCAAGGCA AAGGTAAACG GCAAAGACAG AAGCTTCGTT ATCGACAAGC AAGGGATAAT AAGATGGGCA TTGAAGTTTA TGGTGACGAT GCGACGATGG AACACTATTT TGGAGCTGCG TACACAGAGA AAGGAAAGAA ATCCGGAAAG ACGAAAGGAA TGGGGACGAA AAATCGAAGA TTTGTTAACA TGTATGGGTA CAACCCAGAA GATTACTCGT TCATCCGATT TCTGGACCCA CTCACAGGGA AAACAATGGA TGAACAAGTA TTCACTGACA TAAGTCTCGT CCAAGATGCC TTTGGTAAAG AAAGACTCAA ACTCCTGTCC GAAGGGGAAA TTGAGTCAGA GCACATGCGA AATGGGATTA GAGCTTATCT TGTCAAGAAT CTTACCACAG CAGCTCTCGA AATAGACATG ACCCCTCACA ACTCTTGCCA GCTCGGAACC AAGACAAACA ACATAGCAGG ATTTGTAGAC AGGGAGTACG AATTGCGTCA AACCGGGGAA GCCAGGGTTG TTGCTCCAGC ACTGATTCCA AAAGACAATC CAATCACGGA CGAGGATATT CCCGTAAAGC ATGAAAGCAA GACATTGTTC AGGGGCTTAA GAGATTATAA CCCTATAGCA TCAGCAATAT GCTTGCTCAC TAACGAATCA GACGGAATGA AAGAGACAAT GTACGGCATT GGTTTTGGCA ACACAATTAT TACAAACCAA CACCTATTCA GACGCAACAA TGGCGTACTA AGGGTTCAGT CGAGACATGG TGAATACGTT CTTCCAAATA CAACGCAACT CAAAGTACTT CCTTGCGAAG GAAGGGACAT AATGGTCATC ATTCTTACAC CAGACTTCCC TCCGTTCCCA CAAAAACTGA AATTCCGTCC ACCGATCAAA GGAGAGAAGA TTTGCCTTGT TGGATCCTTA TTTCAAGATA AGAGCATAAC CAGCACCGTA TCCGAGACGA GCGTGACAAC ACCCGTGGAC AACAGCTTCT TGTGGAAACA CTGGATCACT ACAAAAGACG GACATTGCGG GCTTCCACTA GTATCATCAA ATGATGGATA CATAGTCGGA ATCCACAGCG CCACAAGCTC ACGGCAAACA CAGAACTACC ATGCAGCGAT GCCCGAAGAT TTTCATCAAA CACATCTTAT TGATCCAGTT TCGAAATCGT GGGTGAAACA TTGGAAGTAT AATCCAGATA ACATGGTTTG GGGAGGCATA AATCTCATTA ATAGCACGCC AAGGGAACCC TTCAAGATAA ACAAATTAGT GACAGACTTA TTCGGGGATG CAGTACAGTT TCAGTCCAAA CAGGATGAGT GGTTCGCAAG TCAGTTGAAA GGCAACTTGA AAGCAGTGGG GAAAAGCACA AGCCAACTCG TGACAAAGCA CACAGTCAAG GGTAAGTGCA TGATGTTCGA GTTATACCTG CAAACACACG AAGAGGAAAA GGAATTCTTC AAACCACTGA TGGGAGCCTA CCAGAAGAGC CGCTTAAACA GAGAAGCATT TACAAAAGAC ATCATGAAAT ACTCCACACC GATAACAGTA GGCATCGTCG ATTGTGACAC GTTTCTGAAA GCCGAAAAAG GAGTCATAAA ACGCTTAGAG AAACTTGGGT TCAGTGGTTG CGAATATGTC ACAGATGAAG AGGCAATATT TCAAGCCCTA AATATGAAGG CGGCTGTTGG TGCACTATAT AGTGGAAAGA AGAGAGATTA CTTTGAGAGC TACGGTCCAG AAGAAAAAGA GAATATCTTG AGAGAAAGCT GTAAGCGACT ATACACAGGT AAGTTTGGAG TGTGGAATGG GTCACTCAAG TCGGAACTGA GACCTATGGA GAAAGTTATG GCAAATAAGA CACGTGTCTT TACAGCAGCG CCGCTCGACA CTCTGCTTGC TGGAAAAGTC TGTGTTGATG ACTTCAACAA TTACTTCTAC AGCAAAAACA TCGAGGCACC TTGGACAGTT GGCATGACGA AGTTTTATGG TGGGTGGAAC GAACTCCTTA CGAAGTTACC AGACGGCTGG GTTTATTGCG ATGCAGATGG ATCACAATTC GATAGTTCTT TGTCACCATT TCTCATCAAC TCAGTTCTCA GAATACGTTT AAAGTTCATG GAAGATTGGG ATCTTGGTGA ACAAATGCTC AAAAATTTGT ACACAGAAAT TGTATATACA GCGATCCTCA CTCCAGATTC AACCATAGTG AAGAAATTCA AGGGGAATAA CAGCGGACAG CCATCCACGG TAGTAGATAA CACATTGATG GTCGTGCTAG CAATGACATA CACGCTGCAC AAGTTAGGCT TCGAGGACGA GGAACAAGAC TCTATGTGCA AATACTTCGT CAATGGAGAT GACCTGATCA TCGCGATAAA ACCAGAATAT GAATCACTAC TGGATCAGTT CCAACACTGT TTCAAAAGTT TGGGCTTAAA TTACGATTTC AACTCACGAA CGAGGAAGAG GGAGGAATTG TGGTTCATGT CACATTGCGG CATCAAGAAG GATGGAATCT TCATCCCAAA ACTCGAACCA GAGCGCATTG TGTCAATCCT AGAGTGGGAT AGATCAGACC AGCCAGTACA TCGCTTAGAG GCCATATGCG CAGCAATGAT CGAATCATGG GGTTACGACA AGTTAACCCA TGAAATTCGA AAATTTTACA AGTGGTGTCT GGACGAAGCA CCATATGCTG ATTTGGCAAA AGCGGGAAAA GCACCGTACA TAGCAGAGTG TGCTCTTAAA CGATTGTATA CCAGCAAGGA AGCCAGCGAA GCAGAATTAG AAAAATACAT GGAAGCCATA CGTAGTCTTG TCAATGATGA AGATGACGAC GATATGGATG AAGTCTATCA TCAAGTAGAC ACGAAGCTTG ATGCAGGCCA AGGCAGTAAA AATGATGATA AACAGAAGAG CTCAGCGGAT TCAAAAGATA ATGTCATCAC GGAGAAAGGA AGTGGTTCTG GGCAGGTGAG GAAGGATGAC GACATCAACG CAGGGCTACA TGGCAAACAC ACCATACCTC GTACAAAGGC AATCACACAG AAAATGAAGT TACCAATGAT CCGAGGTAAA GTGGCTTTGA ACCTTGATCA TTTGCTGGAG TACGAACCAA ACCAGAGAGA CATATCAAAC ACACGCGCGA CTCAAAAACA ATACGAGTCA TGGTACGACG GAGTTAAGAA TGACTATGAT GTGGATGATA ATGGCATGCA ATTAATTCTG AACGGATTGA TGGTTTGGTG TATAGAAAAC GGGACATCCC CGAATATAAA TGGAACATGG GTGATGATGG ACAGTGAAGA ACAAGTAGAA TATGCTCTGA AACCCATCAT CGAACACGCG AAACCCACGT TTCGCCAGAT AATGGCCCAT TTTAGTGACG CAGCCGAGGC GTACATTGAG ATGAGAAACA AGAAGAAACC GTATATGCCA CGATACGGAC GGCTACGAGG CTTGAACGAT ATGGGGTTAG CTCGCTACGC TTTCGACTTT TACGAAACAA CATCAGCGAC CCCAAATCGG GCGAGAGAGG CGCACAATCA AATGAAGGCA GCTGCTCTAG TGGGAACACA GAACAGACTG TTTGGAATGG ATGGAGGCGG TTCAACCCAG GAAGAGAACA CGGAGAGGCA CACAGCCGCA GATGTAAATC AGAATATGCA CACTCTCTTA GGCGTGAGAG GGTTGCACTA AAGGCGTGTG TTGGCATTTA AAGACTGTAG TATAAATCTA TAATATAGTG AGTGTTTCAC TCCTTTTATG TTTATGTATG CACTTATTTG TCCGTTAGTA TTCTCTCCCT GTACTTCGCT CGTAAGGGCG TAGGTTCAGC TGAGGGCTTT TCTAGTTTCC GCTGTGAGGT TTTACCTCGA AGGTTGCTAG TCTGGTTTTC AGTCGGAGAC 
Length10080
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg933044 cell wall / vacuolar inhibitor of fructosidase 1
1.73205 Ahg915066 aspartate aminotransferase
5.83095 Virus0445
8.12404 Ahg927597
8.3666 Ahg894754 TRAF-like family protein
9.53939 Ahg486972 RING/FYVE/PHD zinc finger superfamily protein
9.79796 Virus2875
14.6629 Ahg923318 UDP-Glycosyltransferase superfamily protein
14.6969 Virus3313
17.8885 Ahg945453 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression