Detail



ID : Ahg933044

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933044|scaffold_401032.1
Sequence
TTCAAGCCCT AAGTTATCCG TATGAGTTCT TCTTCCAGAA ATTTGATCAG CAATTTGCCA AATGAGATTC TTACCAAAAT TCTGTCTTCA CTTGCGACAA AAGTGGTTGC CTCCACACAG ATTCTGTCCA AGAGGTGGAA GAATCTGCTA GGTCTTGTAG ACACCCTTTG GTTTTATGAT TCCATGGTTG TGTATCCAAA CATAAAGAAC AAAAAAGGTG GTTTAGACCG CCTCTGTGAT TTCGTAGAGA AGACATTTGC TCTGTCAAGC AATTCTCCCA TCAAGAAATT ATCTCTGCCT CATCGACCTA GACCTAACCG TCCTCTCCAC AGTTGGATAT GGACTGCAAT GGAACGTGGT TTACTGGAAC TACACTTGCA CGCCGGTCAA GACGATAATG ATGATGCTTA TTTTTCCGTT TGATGACGAT GATGGTTATT GTG 
Length443
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10207179.. 10207621
Download Sequence
A.thaliana
AGI-codeAT1G47960.1
Descriptioncell wall / vacuolar inhibitor of fructosidase 1
TAIR curator summaryPlant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.
Alias[ATC/VIF1][C/VIF1][CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1][cell wall / vacuolar inhibitor of fructosidase 1]
Gene coexpression
MR
MR Locus Description
1.41421 Virus3393
15.0997 Ahg925083
16.7332 Virus1229
19.4679 Ahg887699 basic helix-loop-helix (bHLH) DNA-binding family protein
19.5959 Ahg916106 xyloglucan endotransglucosylase/hydrolase 3
46.4758 Ahg947476
52.5642 Virus1855
52.5642 Virus1007
52.5642 Ahg913031
52.5642 Ahg906657 Uncharacterized protein family (UPF0016)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression