Detail


ID : Ahg311334

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311334|fgenesh1_pm.C_scaffold_1000114
Sequence
ATGGAGAATC CGGTGGGTTT AAGATTCCGT CCGACCGACG AGGAGATCGT CGTCGATTAC CTCCGACCAA AAAATCTCGA AAGGGACACG AGCCATGTCG ATCGAGTCAT TAGCACAGTC ACTATCCGTA GCTTTGATCC TTGGGAGTTA CCTTGCCAGT CGAGGATCAA ACTGAAAGAT GAGTCTTGGT GTTTCTTCAG CCCTAAGGAG AACAAATATG GCAGAGGTGA GCAACAGATT AGAAAAACGA AATCTGGGTT TTGGAAGATT ACTGGAAAAC CAAAGGCTAT CATGCGTAAT CGCCAAAAGA TCGGTGAGAA AAGAATTTTG ATGTTTTACT ACAGTAAGGA ACTCGGTGGA TCCAAATCCG ATTGGGTTAT GCACGAGTAC CACGCTTTCT CTCCTACTCA GATGATGATG ACATACACAA TCTGTAAAGT TATGTTTAAG GGTGACGTGA GAGAGATTCC TTCTGCTTCT TCTTCTTCTT CTTCTCATGG TAGTGGAATT GAGCAGAGTC GTCCCTCTTT AATCCCTCTT CTTGAGAACA ATTCTGAGGG ATCGTCCTTT CACAGCCAAG AGTTACAGAA TCCAAGTCGG GTTGGTGATG TGCAGCAAGA AGCTCGAATC GAGGATGCTA TACCGAGAGA GGAATGGGAA ACATGGTTGA ATGATGATGA TGCTGGTGAA CAGAGGAGTA TCATGTTTAT GCAAGATAAT CGCAATGAGT ACAGACCTCC AAAGTCATTA ACTGGTGTCT TCAGTGATTA TAGCAGTGAT GATAATGATT CGGATTTGCT ATCTGCAACT ACGAATTCTA TCCAAACTTG GAGCACTTGT GATAGTTTTG GTAGCTCAAA TCATCGCGTA GACAAAATCA AAGACCTGAA ACAATCTCCT AAATCAACAA TCAAGTTAGT GTCACTAACT CAAGAGGTGA GCCAAGCTCT GATAACCAGT ATCGATACAC CCGAGAAGAA GAAGAATCCT TCTAATGATG CACAAGAGAC TGAGATTGGA GAGCATAAAT TGGGTCAAGA GACGATCAAG AAGAAAAGTG CTGGTTTCTT TCACAGGATG ATACAAAAAT TCGTCAAGAA AATTCACCTT TGTTCTTCTA TCTCAAGAAC TTGA
Length1134
Protein Sequence
Protein Residue
Map Locationscaffold_1: 509210.. 510759
Download Sequence
A.thaliana
AGI-codeAT3G04420.1
DescriptionNAC domain containing protein 48
TAIR curator summary
Alias[anac048][NAC048][NAC domain containing protein 48]
Gene coexpression
MR
MR Locus Description
19.6977 Ahg932721
22.561 Ahg353119 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
28.9828 Ahg344726
34.8138 Ahg924719 Plant invertase/pectin methylesterase inhibitor superfamily protein
40.9878 Ahg494028 NAC domain containing protein 6
47.0744 Ahg495830 villin, putative
55.6776 Ahg484673 NAC domain containing protein 3
59.7495 Ahg497092 P-loop containing nucleoside triphosphate hydrolases superfamily protein
59.7495 Ahg476096 Protein of unknown function (DUF1666)
59.925 Ahg483895 myb domain protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression