Detail



ID : Ahg312135

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312135|fgenesh1_pm.C_scaffold_1000915
Sequence
ATGTACAGGC GGAAAAGTCG CTCTATTTCT CCTAGGCGCC ATCAAAGTCG ATCTGTTACT CCTAAGAGAC GTTCTCCAAC CCCAAAACGT TACAAAAGAC AAAAGAATAG GAGTTCAACT CCATCTCCTG CAAAAGGATC TCCTGCCGCA ACCCTTGAGT CAGCTAAACA TAGAAATGGA GAAAAACTTA AAAGAGAAGA GGAAGAGCGA AAAAGGCGAC AGCAGGAAGC AGAACTGAAG CTAATAGAGG AAGAAACTGT AAAACGGGTT GAAGAAGCTA TTCGAAAAAA GGTCGTGGAA AGCTTACAGT CTGAGAAAAT AAAATTGGAA ATTCTAACGC TGTTGGAGGA AGGTCGAAAG AGACTTGATG AAGAAGTCGC GGCTCAACTT GAGAAGGAGA AAGAGGCTTC TCTTATTGAG GCTAAAGAAA AAGAGGAAAG AGAGCAACAA GAGAAAGAAG AGAGTGAGAG AATAGCAGAG GAGAACCTTA AGAGAGTGGA AGAAGCTCAG AGAAAAGAAG CAATGGAAAG GCAAAGGAAA GAGGAGGAAC GGTATCGGGA GCTCGAGGAG CTGCAACGAC AGAAAGAAGA AGCAATGCGA AGGAAGAAAG CGGAAGAGGA AGAAGAACGT CTCAAACAGA TGAAACTGTT GGGTAAAAAC AAATCACGCC CTAAATTATC TTTTGCCTTA AGCTCCAAAG CATTTTTTGT TACAATGACG ACGATGTCTG ATCTTGACGA AAATATGGTA GCTGAGATAC TTTGCAGGAC TCCGATGACA TGTCTGAAAA CAGTGCGATC TATTTGCAAA AAGTGGAATA CTTTATCCAA AAAATGGGTT TACTTTGGTA AAGCGAAGCA GTTTCTTGGA TTCATGATGA TGGATTCAAG GGTCTGTTCC TTGAGATTCG ATCTCCGCAA CGACAGCTTC GAGCCACCAT CTATAAAGCA GATAAGTATA CTTGATCAAA TCGAGGTATC TAAAATCTTT CACTGCGACG GTTTATTGTT ATGCGTAATC AAAGATGACA CGAATAAGCT CTTGGTCTGG AATCCTTATT TGGGGCAAAC GAGGTGGATC CAACCCAGAC AGAGTTTCCA CAGATTAGAC AGTTATGCTC TTGGACATGA CAACAACGGT AAACACAAAA TCTTGAGGTT TGTGGATGAT ATCTTACCTG TCAAAAACGT GGGAAACACT TACTTTTTCG CTAAACAGAG ATTAATATTT GAAGGAGAGG GACCTGTAGA CATAGATATA ACAGAGACCG AAGACTTTTT ACTCTGTTTT GATTTTACTG CTGAGAGATT TGGACCGCGT CTTCCTCTTC CTTTTCACTC TTATTTCGAC GAGACTGTGA CTCTATCTTG TGTTAAAGAA GATCAGCTCT CCATCTTATA CCAGCCCTTG GTGCCATATG AGATCATGGA GATTTGGGTT TCCACTAATA TTGAGCCCAA TGCTGTGTCG TGGAGCATGT TTTTGAAAGT GGATATGAGA CCACTCACTG GTTTTCAGTT TGACGTTATG GCTGGGAGTT TCTTCATTGA CCAGGAGAAC AAAGTCGCCG TGGTTTTTGA TCTTGACCCA TATCCACAAT CCGTGACCCG TCGCTACCAA ACAGCTTACA TCATTGGACA AGATGGTGGA TACTTCAAAT CTGTTGATAT CGGAGAAGCT CCAAATATCA TGACACGTGA CAGCTACGGA TATATTGGCC CCATGTATTG TGTCCCGCTT GTGTGCTCCT CTTATGTTCC AAGTTTAGTG CAGATAGATT AG 
Length1782
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4132276.. 4135372
Download Sequence
A.thaliana
AGI-codeAT1G10890.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg322459
7.2111 Ahg314047 Transducin/WD40 repeat-like superfamily protein
7.74597 Ahg484347 Protein kinase superfamily protein
8.12404 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
9.48683 Ahg933547 high-level expression of sugar-inducible gene 2
9.74679 Ahg925037 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
13.2288 Ahg940935 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
13.7113 Ahg483824 RNA-binding (RRM/RBD/RNP motifs) family protein
13.9642 Ahg472236
14.4914 Ahg951394
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression