| Annotation |
|---|
| Description | jgi|Araly1|933547|scaffold_401535.1 |
| Sequence |
AAAATCTAGG TGGGTTTGTG ATGTTTGAAG TCAAAATGGT GTCAAAGATG TGCATGAACG CTTCATGTGG TACGACTTCT ACTGTTGAAT GGAAGAAAGG TTGGCCTCTT CGATCTGGTC TTCTCGCTGA TCTCTGTTAT CGTTGCGGAT CTGCGTATGA GAGTTCTCTT TTCTGTGAAC AATTCCATAA GGACCAATCT GGTTGGAGGG AATGCTATTT GTGTAACAAG AGACTACATT GCGGATGCAT TGCTTCTAAG GTAACGATTG AGCTTATGGA CTATGGTGGT GTTGGTTGTA GTACTTGTAC TTGCTGCCAT CAACTCAATT TGAACACGAG GGGTGAGAAT CCAGGTGTTT TTAGCAGATT GCCAATGAAA CTGTTAGCTG ATAGACAACA TGTAAATGGC GAAAGCGGAA TGAATATTGA CGGAGGAAGA AACGAAGCCG GTCTCTTTTC TCAGCCACTA GTCATGGGCG GCGATAAAAG GGAAGAGTTC ATGCCTCACC GCGGGCTTGG TCAGCTAATG AATTCAGAAA ACACCACCAC CGGGTATAGG CTGGATGCTG CTGGGGAAAT ACATGAATCA TCACCTTCAC AGCCATCTTT GAATATGGGT TTGGCTGTAA ATCCTTTTAG CCCATCTTTT GCAACCGAGG GTGTCGAGGG AAAGAAACAC ATCAGTGCTT CTCAGTCCAA CATGGTCCAT TGCTCTGCCT CTAATATACT GCAAAAGCCA TCAAAACCTG CTATTTCAAC TCCTCCTGTG GCTAGTAAAT CCGCTCAGGC GCGGATTGGA AGGCCTCCTG TCGAAGGGCG AGGGAAAGGC CACTTACTTC CGCGGTATTG GCCAAAATAT ACGGATAAAG AGGTTCAGCA GATCTCTGGA AATTTGAATC TGAACATTGT ACCTCTCTTT GAGAAAACTC TTAGTGCCAG TGATGCTGGT CGCATTGGTC GTCTAGTTCT TCCAAAAGCC TGTGCAGAGG CATATTTTCC TCCGATTAGT CAATCGGAGG GCATTCCTCT GAAAATCCAA GATGTGAGGG GTAAGGAGTG GACGTTCCAG TTCAGATATT GGCCCAATAA CAACAGTAGA ATGTATGTTT TAGAAGGTGT CACTCCATGC ATACAGTCCA TGATGCTACA GGCTGGTGAT ACAGTAACTT TCAGTCGGGT TGATCCTGGT GGAAAACTAA TCATGGGTTC TAGAAAGGCA GCTAATGCTG GAGACATGCA GGGTTGTGGT CTCACCAATG GAACTTCAAC CGAGGACACA TCATCGTCTG GTGTTACAGA AAACCCACCC TCCATAAATG GTTCATCGTG TCCCTCACTA ATACCGCAAG AATTGAACGG TATGCCTGAA AATTTGAGCT CACAGAAGAG TGAGACTAAC GGGGGCAGGA TAGGTGATGA TCCTACACGA GTTAAAGAGA AGAAGAGAAC TCGAACCATT GGGGCAAAAA ATAAGAGACT TCTTTTGCAT AGTGAAGAAT CTATGGAGCT GAGACTCACC TGGGAAGAAG CTCAGGACTT GCTTCGTCCC TCTCCTAGTG CAAAGCCTAC CATCGTCGTC ATTGAGGAGA AAGAAATTGA AGAATATGAC GAACCTCCTG TCTTTGGAAA GAGGACTATA GTCACTACAA GACCTTCAGG TGAACAGGAA CGCTGGGCAA CTTGCGACGA CTGCTCTAAA TGGAGAAGGT TACCTGTAGA CGCTCTTCTT CCCTTTAAAT GGACATGTAT AGACAATGTT TGGGACGTGA GCAGGTGTTC ATGTTCTGCA CCGGAGGAGA GTCTGAAGGA ACTTGAGAAT GTTCTTAAAG TAGGAAGAGA GTACAAGAAG AGAAGAACTG GGGAAAGCCA GGCAGCAAAA AGTCAGCAAG AACCGTGTGG TTTGGATGCA CTGGCGAGTG CAGCAGTCTT AGGAGACACA ATAGGCGAGC CAGAGGTTGC CACCACGACC AGACATCCAA GGCACAGGGC TGGATGCTCT TGCATCGTGT GCATTCAGCC ACCAAGTGGG AAAGGTAGAC ACAAGCCTAC ATGTGGGTGC ACTGTGTGTA GCACCGTGAA GAGAAGGTTC AAAACGCTTA TGATGAGGAG GAAGAAGAAG CAGTTGGAGC GCGATGTAAC AGCAGCAGAA GATAAGAAGA AGAAGGACAT GGAACTGGCT GAGTCTGATA AGAGTAAGGA GGAGAAGGAT GTGAACACAG CGAGGATAGA TCTGAACAGT GATCCATACA ACAAAGAAGA TGCTGAAGCT GTGGCGGTGG AGAAAGAAGA GAGTCGAAAA AGAGCAATTG GACAGTGTTC AGGGGTGGTG ACTCAAGGCG CCGGTGATGT ATTAGGCGTT ACGGAGTTAG AAGGAGAGGC TAAGAAAGTT GGTGAAGAGC CGAGAGTTTC AAGCTAATAT GGAAGGAGAA AAACGAA |
| Length | 2437 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13510654.. 13514603 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G30470.1 |
| Description | high-level expression of sugar-inducible gene 2 |
| TAIR curator summary | HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain. |
| Alias | [HSI2][VAL1][high-level expression of sugar-inducible gene 2][VP1/ABI3-LIKE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg936283 | Protein of unknown function (DUF1644) |
| 2.64575 |
Ahg485225 | DEK domain-containing chromatin associated protein |
| 2.82843 |
Ahg473745 | |
| 5.09902 |
Ahg920182 | embryo defective 1745 |
| 6.7082 |
Ahg317971 | ubiquitin-specific protease 13 |
| 7 |
Ahg487510 | bZIP transcription factor family protein |
| 7.74597 |
Ahg916765 | RPM1 interacting protein 3 |
| 8.06226 |
Ahg482372 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 9.16515 |
Ahg481500 | arginine-rich cyclin 1 |
| 9.48683 |
Ahg312135 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|