Detail



ID : Ahg312807

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312807|fgenesh1_pm.C_scaffold_1001587
Sequence
ATGAGGCGTT GGCAGCCGGT GGATCACCGG CGGCGAGGTA GAAGGAGATT GTCGAGTTGG ATATGGTTTC TCCTTGGTTC TTTCTCTGTC GCTGGATTAG TTCTCTTCAT GGTTCAGCAT TATCACCATC AACAAGATCC ATCTCAGCTT TTAGTTGAGA GAGACACGAG AACTGAAATG GTATCCCCTA CCCGTTTAAA CTTCACAGAA GAGGTCACAA GTGCTTCCTC ATTCTCTAGG CAGTTAGCAG AGCAAATGAC ACTTGCCAAG GCTTATGTTT TTATAGCTAA AGAGCACAAT AATCTTCATT TAGCTTGGGA ATTGAGTTCT AAGATCAGAA GTTGTCAGCT TCTGCTCTCG AAAGCAGCAA TGAGAGGACA ACCTATTTCG TTAGATGAGT CAAAACCGAT TATTAGTGGT CTATCAGCTC TTATCTATAA GGCTCAAGAT GCACATTACG ACATAGCCAC CACAATGATG ACCATGAAAT CTCACATCCA AGCCCTTGAA GAACGTGCAA ATGCAGCTAC CGTTCAAACC ACAATCTTTG GGCAGTTGGT TGCTGAGGCA CTACCAAAGA GCATCCACTG TCTGATTATA AAGCTCACAT CTGATTGGTT AATAGAGCCA TCTCGCCATG AACTAGCAGA TGAAAACAGA AACTCACCTA GACTTGTCGA CAACAACCTC TACCATTTCT GCATCTTCTC GGACAACGTT ATTGCCACCT CGGTTGTTGT TAATTCGACT GTCTCAAATG CTGATCACCC GAAACAGCTT GTTTTCCACA TAGTGACGAA TCGAGTGAGC TACAAAGCTA TGCAGGCCTG GTTTCTGAGT AATGACTTCA AGGGCTCAGC TATAGAGATC AGGAGCATAG AGGAGTTTTC TTGGTTGAAT GCTTCGTATT CTCCTGTTGT TAAGCAACTG CTGGACACAG ATGCAAGAGC TTACTATTTC GGGGAACAGA CAAGTCAAGA TACGATTTCC GAGCCAAAAG TGAGGAACCC AAAGTACTTG TCATTACTGA ACCATCTCAG ATTCTACATT CCTGAGATCT ATCCGCAGCT AGAGAAGATC ATTTTCCTAG ACGATGATGT TGTTGTTCAG AAAGATTTGA CACCACTCTT CTCCTTGGAT CTGCACGGAA ACGTCAATGG AGCTGTGGAA ACATGTCTTG AAGCCTTTCA CCGTTATTAC AAGTATCTAA ATTTCTCGAA CCCACTCATC AGCTCAAAGT TCGACCCACA AGCATGTGGA TGGGCGTTTG GTATGAACGT TTTTGATCTG ATCGCTTGGA GGAAAGCGAA CGTGACTGCT CGGTACCATT ACTGGCAAGA GCAGAACAGA GAACGAACGC TTTGGAAACT CGGGACACTC CCTCCAGGTC TACTGTCTTT CTATGGTCTC ACAGAGCCAC TGGATAGAAG ATGGCATGTC TTGGGCTTAG GTTACGATGT GAACATCGAT AACCGTCTGA TAGAAACCGC AGCTGTGATT CACTATAATG GTAACATGAA GCCTTGGCTA AAGCTGGGCA TTGGTAGGTA TAAACCTTTC TGGTTAAGGT TTTTGAACTC GAGCCATCCT TATTTACAAG ATTGTGTCAC AGCTTAA 
Length1617
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7431765.. 7433941
Download Sequence
A.thaliana
AGI-codeAT1G18580.1
Descriptiongalacturonosyltransferase 11
TAIR curator summaryEncodes a protein with putative galacturonosyltransferase activity.
Alias[GAUT11][galacturonosyltransferase 11]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg490031 alpha/beta-Hydrolases superfamily protein
11.6619 Ahg938543 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
17.2337 Ahg917653 type one serine/threonine protein phosphatase 2
23.1084 Ahg482512 basic region/leucine zipper transcription factor 16
24.4949 Ahg479664 DNA binding
27.4955 Ahg943453
28.9828 Ahg495793 myristoyl-CoA:protein N-myristoyltransferase
29.7489 Ahg485217 nuclear factor Y, subunit C1
51.8459 Ahg471734 SNARE-like superfamily protein
57.1577 Ahg908068 Zinc knuckle (CCHC-type) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression