Detail



ID : Ahg917653

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917653|Al_scaffold_0008_2404
Sequence
ATGGCGCAAC AAGGGCAGGG AAGCATGGAC CCTGCCGTTC TCGATGATAT CATTCGTCGT TTGTTGGATT ACAGAAACCC TAAGCCTGGT ACGAAGCAGG TTATGCTCAC CGAGTCTGAG ATCCGACAGC TTTGCATCGT CTCTAGAGAG ATTTTCCTTC AACAGCCTAA CCTCCTTGAG CTCGAAGCTC CTATCAAGAT CTGCGGTGAT ATTCATGGAC AATACTCTGA TCTATTGAGG CTGTTTGAGT ATGGAGGCTT CCCACCTACA GCTAACTATT TATTCTTAGG AGATTACGTG GACCGCGGCA AGCAGAGTTT GGAGACTATT TGTCTTCTGC TTGCCTACAA AATCAAATAC CCCGAGAACT TTTTTCTTCT TAGAGGAAAC CACGAATGTG CTTCTATTAA CAGAATCTAT GGATTCTATG ATGAATGTAA ACGTCGATTC AGTGTGAGAC TCTGGAAAGT GTTTACAGAT TCTTTTAACT GTCTCCCCGT CGCTGCTGTT ATAGACGATA AGATATTATG TATGCACGGT GGGCTTTCTC CCGATTTGAC CAATGTGGAA GAGATTAAGA ACATTAAGCG ACCTACCGAT GTTCCAGACT CTGGTTTGCT CTGTGATCTG CTTTGGTCTG ATCCAAGCAA AGATGTCAAA GGTTGGGGGA TGAATGATCG TGGAGTCTCT TACACGTTTG GGCCTGACAA AGTCGCCGAA TTTCTAATAA AGAATGATAT GGACCTCATC TGCCGTGCCC ACCAGGTTGT AGAGGATGGG TATGAGTTTT TCGCCGATAG ACAGCTTGTT ACGATATTTT CTGCTCCCAA CTACTGCGGT GAATTTGACA ATGCTGGTGC TATGATGAGT GTTGATGAAA GTTTAATGTG CTCTTTCCAA ATTCTTAAGC CTGCTGATCG AAGGCCCCGG TTCTTATGA 
Length939
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17801001.. 17802548
Download Sequence
A.thaliana
AGI-codeAT5G59160.1
Descriptiontype one serine/threonine protein phosphatase 2
TAIR curator summaryEncodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.
Alias[PPO][TOPP2][PROTOPORPHYRINOGEN OXIDASE][type one serine/threonine protein phosphatase 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg483334 vascular plant one zinc finger protein 2
3.87298 Ahg478870 LRR and NB-ARC domains-containing disease resistance protein
4.24264 Ahg495345 NAD(P)-binding Rossmann-fold superfamily protein
4.58258 Ahg477602 Protein of unknown function (DUF3550/UPF0682)
5.2915 Ahg482295 hydroxyproline-rich glycoprotein family protein
5.65685 Ahg495363
9.53939 Ahg908145
11.225 Ahg489460
11.4891 Ahg495822 Pentatricopeptide repeat (PPR) superfamily protein
12.49 Ahg893705 disease resistance protein (TIR-NBS-LRR class)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression