Detail



ID : Ahg908068

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908068|Al_scaffold_0002_1149
Sequence
ATGGAGAGCA CTAGATCGGA CCCAGAGCTT GATGATGACT TTAGTGAAAT CTACAAGGAG TATACTGGTC CTGCAAGTAC TGTGACCAAC AACACTATCC AAGACAAAGA CAAACCTATC AAACAACGTT CTGAAGAAAG ATGTGATGAA GAAGAGCAAC TACCTGACCC CAATTCTGTA CCAACTGATT TCACTAGCCG AGAAGCTAAG GTTTGGGAGG CTAAATCCAA AGCTACTGAG AGGAATTGGA AGAAGAGAAA AGAAGAAGAA ATGATCTGTA AAATATGTGG CGAGTCTGGT CATTTTACTC AGGGATGTCC ATCTACACTT GGTGCCAACA GGAAGTCTCA AGAATTCTTT GAAAGGGTAC CAGCTAGGGA CAATAATGTG AGAGTTTTGT TTACTGAGCA AGTTATAGAA AGTATTGAAA GGGAGACCGG CTGCAAGATT AAAATGGATG AGAAGTTCAT AATTGTTAGT GGCAAGGACA GATTAATCTT GAGGAAAGGT GTTGATGCTG TTCACAAGGT TAAGGAGGAT GGTGAGATGA AAAGTTCTTC TGTTTCCCAC AGGAGCAGAT CGAGGTCACC TAGGCGAACT TCTGTTGGTC CACCACGTGC TCGAAACTCT GAACCTCAAA GGCAGCACCC TCCATCACAT GGTTCATCAA GTTTCCCAGA GCGCTCTGGA AGGCAAGATA AGTTTGTGGA TAATCGTGTG CGCGAAGAGA ATCGTATACG TGAGAATCAG CGAAATGTTT CCCGAGGATC ACCACAAGCT TATGGTAGTG ACAGAGCTCG GAGTCGTTCC ACACATTCGA AATCTCCAGG GAGACCACGT TATAGTGGAT GGGATAAACC GTATGATAGG CAAAAGTCTG AGGTGAGTGG TTATAGGTCT GAAAGATGGG ATCAGGAGAG AATGGGTGGC TCCAGCGATA TTCAGGTGAG ACATCAGTTT GAACGCCCTC CTTTCCCACA GACTTTAGAA GAACTAGAAT TGGAATATAC GAGGGATGCA ATGGAGCTTG AAAAAAAGTG CGATAAAGAA GAAGATGAGG AGAACATCAA GCATCGTGAG ACAATCCGGG AACTGAGAGA GAGTTACATG AAGAAACTGG CTGGGCTAAG GGGTATGAAT GCTAAACAAT GGGATGAATT CCTTCAACTG GATGCTCAGA GACGTCAACA GCAAGCACGG CAGCAAAACT CTGGCCTGAA TTATGGTAAC TATAGACAGT TTCCTCCTTA TGCTGAGTTT GATGATGGCT ACTCTTCAAA TCCTCCTCCC TATGGTGGAA ACAATGTGCC AATGGATTCC AAGGGAAGAT ATCCAAATCA TGGAGATAAC TATTCTTCAA GGCATCAAGA CAACAATTAT GGTGGGTTCC AACGCCAGAG ACGTGAGGAC TATGGAAAAG CCTACAATCG TTATTAG 
Length1437
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9876613.. 9878705
Download Sequence
A.thaliana
AGI-codeAT3G62330.1
DescriptionZinc knuckle (CCHC-type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg324667 Zinc knuckle (CCHC-type) family protein
7.34847 Ahg473514 SUPPRESSOR OF AUXIN RESISTANCE1
8 Ahg929879
9.38083 Ahg489866 light-mediated development protein 1 / deetiolated1 (DET1)
9.79796 Ahg324272 Pectin lyase-like superfamily protein
25.4558 Ahg926472 Pentatricopeptide repeat (PPR) superfamily protein
27.3861 Ahg945436 Uncharacterised conserved protein UCP022280
30.2985 Ahg929889 pre-mRNA-processing protein 40C
30.4467 Ahg482091 ARM repeat superfamily protein
32.6343 Ahg479582 PDI-like 5-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression