Detail



ID : Ahg312861

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312861|fgenesh1_pm.C_scaffold_1001641
Sequence
ATGAAGTTAT CGCCTCTGAG TTTCTCTACG AGTTCGAGTT TCAGTCACGC CGATGGAATC GATGACGGTG TTGAGTTAAG ATCATCTCCA TTTGCCGGCG GCGCAATGCT GCCGGTTTTT CTCAACGGTT TGAGTCGTAA CAGTGGAGAA TCCGGAAGTA GTAGCTGGGA AAGAGAGCTC GTGGAGGTGA CGTTGGAGCT CGACGTCGGC GATGACTCCA TACTCGTTTG CGGAATGTCG GAGGCGGCGT CTGTTGATTC TCGGCCGAGA TCGGTGGATT TAGTAACCGC GAGATTGTCG AGGAATCTAT CGAATGCATC TACGAGAATC CGGCAGAAAC TGGGGAAATT ACTGAGGTCG GAGTCTTGGA AAACGACGAC GTCTTCTACC GCCGGCGAGA GAGATAGAGA TCTCGAACGT CAGACGGCGG AGACTTCGGG AATTATGACG GCGAGGGATA AACGGAGAGA AAACGCGATA TTACAGCGAT CAACGTCGAG TGCGCAAAGA GCGTTAAAAG GATTACAATT TATCAATAAA ACCACGAGAG GAAACAGCTG CGACTGCGAT TGGGATTGCA ATTGCGATCA GATGTGGAAA AAAGTTGAGA AACGATTCGA ATCGCTTGCT AAAGAAGGAC TACTCGCGCG AGACGATTTT GGCGAGTGCG TTGGGATGGT GGATTCGAAG GAATTCGCGG TCAGTGTATT CGACGCTTTG GCTCGAAGAA GGAGACAGAA ACTGGAGAAG ATAACGAGAG ATGAACTTCA TGACTTCTGG TTACAGATTT CTGACCAAAG CTTCGACGCC CGTCTTCAAA TTTTCTTCGA CATGGCTGAT AGCAACGAAG ATGGGAAGAT CACTAGAGAA GAAATCAAAG AACTTTTGAT GCTAAGTGCA TCAGCAAACA AGTTAGCAAA ACTCAAGGAA CAAGCAGAAG AGTACGCATC TCTGATCATG GAAGAACTTG ATCCAGAGAA TTTTGGATAC ATTGAGTTAT GGCAACTCGA GACACTCTTA CTTCAGAGAG ACGCATACAT GAATTACAGT AGACCGCTTA GCACAACAAG CGCTGGAGTG AGTACACCAA GACGGAATCT AATCAGACCT CGTCATGTGG TTCGAAAATG TAGAAAAAAA CTTCAGTGTC TGGTTCTAGA TAACTGGCAA AGAAGCTGGG TTCTTTTGCT GTGGATCATG CTTATGGCCA TCCTATTCGT CTGGAAGTTT CTTGAGTACA GAGAGAAAGC TGCGTTTAAG GTCATGGGGT ATTGTTTAAC CACTGCTAAA GGAGCTGCAG AGACTCTTAA GCTCAATATG GCTCTGGTTT TATTACCTGT CTGCAGAAAC ACATTGACTT GGCTAAGATC TACACGCGCT CGAGCTTGTG TTCCTTTTGA TGACAACATC AATTTCCATA AGATTATTGC TTGTGCCATA GCGATTGGGA TACTTGTTCA TGCTGGTACT CATTTGGCGT GTGATTTCCC CCGGATTATA AACTCGAGTC CAGAAGAATT CGCCTTGATT GCTTCTGCCT TCAATGGTAC TAAGCCCACA TTCAAAGACC TGATGACAGG TGCAGAAGGA ATCACTGGGA TCTCGATGGT GATCTTGACA ACCATCGCAT TCACATTAGC ATCAACTCAT TTCAGGAGAA ACCGTGTGAG GCTTCCGGCA CCACTTGATC GGTTGACTGG CTTTAACGCA TTCTGGTACA CTCATCACCT TCTAGTGGTT GTCTACATCA TGCTCATTGT CCACGGTACC TTCCTGTTCT TTGCTGATAA GTGGTATCAG AAAACTACTT GGATGTACAT CTCGGTTCCT TTGGTGCTCT ATGTGGCAGA ACGAAGTCTG CGAGCTTGTA GGTCAAAGCA TTACTCTGTT TCTATGCTAC CTGGAGAAGT ACTCAGCTTA ATCATGTCAA AGCCTCCTGG ATTCAAGTAC AAGAGCGGTC AATACATATT CTTGCAGTGT CCAACTATCT CTCGATTTGA ATGGCACCCA TTTTCTATTA CCTCTGCACC AGGAGATGAC CAACTTAGTG TTCACATCCG AACACTCGGA GACTGGACAG AGGAGCTACG ACGAGTTCTA ACTGTGGGCA AAGATCTTTC AACATGCGTG ATTGGGCGTT CAAAATTCTC TGCCTATTGC AATATTGATA CAATAAACCG ACCGAAATTA CTAGTAGACG GCCCATATGG AGCTCCAGCA CAGGACTACA GAAGCTATGA TGTCTTACTC CTCATTGGAT TGGGAATAGG AGCTACTCCT TTCATAAGTA TCCTGAAGGA TCTCCTGAAC AATTCAAGAG ACGAACAAAC AGACAATGAA TTCAGCAGAT CGGATTTCAG CTGGAATAGC TATACCTCTT CATATACCAC AACAACCCCA ACTTCAACAC ATGGAGGGAA AAAGAAAGCA GTGAAGGCTC ACTTTTACTG GGTCACAAGG GAGCCAGGAT CCGTTGAATG GTTTAGAGGA GTAATGGAAG AAATATCAGA CATGGACTGC AGAGGCCAGA TTGAGTTGCA CAACTACCTT ACAAGCGTAT ATGATGAAGG TGATGCAAGA TCAACCCTGA TAAAAATGGT TCAGGCTTTG AACCATGCCA AACATGGAGT TGATATTCTA TCCGGAACAC GGGTGAGAAC ACATTTTGCA AGGCCCAACT GGAAGGAAGT CTTCAGTAGC ATAGCAAGAA AGCATCCAAA TTCGACAGTC GGCGTGTTTT ACTGCGGCAT ACCAACCGTG GCAAAGGAGT TGAAGAAGCA AGCACAAGAC ATGAGTCAAA AAACAACCAC ACGGTTCGAA TTCCATAAGG AGCATTTCTA A 
Length2841
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7740357.. 7745239
Download Sequence
A.thaliana
AGI-codeAT1G19230.2
DescriptionRiboflavin synthase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.1595 Ahg486726 VANGUARD 1 homolog 2
45.4092 Ahg494865 Pectin lyase-like superfamily protein
54.2218 Ahg945635 isopentenyltransferase 4
63.5453 Ahg930033 Integrase-type DNA-binding superfamily protein
63.9687 Ahg351609 Protein of Unknown Function (DUF239)
68.9057 Ahg942361 Protein of unknown function (DUF679)
68.9202 Ahg335836 EF hand calcium-binding protein family
71.9722 Ahg945147 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
78.867 Ahg470212 Outward rectifying potassium channel protein
92.2605 Ahg949069 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression