Detail



ID : Ahg313033

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313033|fgenesh1_pm.C_scaffold_1001813
Sequence
ATGGCGATCT GGTTTGCTAG ATCCAAAAAC CTTGTTTCTA GCTTGAGACA TAATCTGAAT TTGTCGGCGA TTCTCAACAA ATGCGATTAC TTTCCTCGTC CGATCTTCTT TTCAACAACT TCTCAGTTAT CTTCCACGTC GTTTTTGAGT CCCGTCGCTA GCCTCCGTCA TGAGTCTACG GCTGTGGAGA CACAGCCTGA TCATTTGGTT CAGATTGATG AAGACGATGG TCAGGAATTG GATTTTCCGG GAGGCAAAGT CGGTTACACA TCTGAAATGA AATTCATACC GGAATCATCT TCTCGGAGAA TTCCGTGTTA CCGGGTTCTT GACGAAGACG GACGAATTAT CCCCGATAGC GATTTTATAC CGGTGAGTGA GAAACTCGCT GTTAGAATGT ACGAACAAAT GGCGACGCTA CAAGTAATGG ATCACATCTT CTACGAAGCT CAACGTCAAG GAAGAATCTC GTTTTATCTT ACTTCCGTCG GAGAAGAAGC CATTAACATC GCTTCTGCAG CTGCTCTCAG TCCTGACGAT GTCGTTTTAC CTCAATACCG AGAGCCTGGA GTTCTTCTAT GGCGTGGCTT CACGTTGGAG GAGTTTGCTA ATCAGTGTTT TGGGAATAAA GCTGATTATG GCAAAGGCAG ACAAATGCCG ATTCATTACG GTTCCAATCG TCTCAATTAC TTCACTATCT CCTCTCCAAT TGCCACGCAA CTTCCTCAAG CTGCTGGAGT TGGTTATTCT CTGAAAATGG ACAAGAAGAA CGCTTGTGCA GTAACATTCA TCGGAGATGG TGGCACAAGC GAGGGAGATT TCCACGCCGG ATTGAATTTT GCGGCAGTAA TGGAAGCTCC GGTCGTGTTT ATCTGTCGGA ACAACGGTTG GGCGATTAGT ACTCATATCT CAGAACAGTT CAGAAGTGAT GGAATTGTTG TGAAAGGTCA AGCTTATGGA ATCCGAAGCA TTCGTGTGGA CGGTAATGAT GCACTCGCGG TTTATACTGC GGTACGCTCG GCTCGAGAAA TGGCTGTAAC AGAACAAAGA CCAGTTCTCA TTGAGGCGAT GACATATAGA GTAGGACATC ATTCTACATC AGATGATTCA ACTAAGTACA GGGCGGCGGA TGAAATCCAG TACTGGAAAA TGTCGAGAAA CCCTGTGAAT AGATTCCGGA AATGGGTCGA GGATAACGGA TGGTGGAGTG AGGAAGATGA ATCCAAGCTA AGATCTAAGG CAAGAAAACA GCTTCTGCAA GCGATTCAGG CGGCAGAGAA GTGGGAGAAA CAACCATTGA CAGAGTTGTT TAACGATGTA TATGATGTTA AACCGAAGAA TCTAGAAGAG CAAGAACTTG GTTTAAAGGA ATTAGTAGAG AAACAACCTC AAGATTATCC TCCTGGTTTT CATGTTTGA 
Length1419
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8797050.. 8799785
Download Sequence
A.thaliana
AGI-codeAT1G21400.1
DescriptionThiamin diphosphate-binding fold (THDP-binding) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg470764 highly ABA-induced PP2C gene 2
9.21954 Ahg488204 pheophytinase
10.247 Ahg919779 branched-chain amino acid transaminase 2
13.6382 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
17.2337 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
22.0907 Ahg490677 Papain family cysteine protease
25.5147 Ahg488062 pyrimidine 2
27.0555 Ahg951350 acyl-CoA oxidase 2
28 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
28.4956 Ahg488679
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression