Detail



ID : Ahg314757

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314757|fgenesh1_pm.C_scaffold_1003537
Sequence
ATGTGGAAGA GCATAGGAGA ATTGAGTTGC GATGACTATG TCAAAGCTGG ATTGACTTTG GAAGACGCCA AGGGATTTGA CAAATTGGTG AGGGATGTGA TTTCAACGGC TATAGAGACT GATCCAAGAG ATCAATGGAA GGCTTTGGTG GATGAGAGTT TGCTTAAGCC ATGGCATCCT CATCCCCTGC ATCAGCTTCT CTACTACTCT GTCTACTCAA ACTGGGACTC CTCTGCTCTT GGCCCTCCTC TCTATTGGTT TCCTTCTCCA TCTCAGTCAA AATCAACAAA TTTGGGGAAG CTGATGGAAA CTCACGGGTC AAGACTTCTT GGTCCTACAT ACAAGAACCC TCTTGAAAGT TTTGAACTTT TCCGGAGATT CTCAGTTGAA CACCCTGAAG TTTATTGGTC AATTGTTATC GATGAGCTTT CACTTGTGTT TCATACTCCT CCGAGGTGTA TCCTTGACAA ATCAAAACCT GGAGGGACTT GGCTCCTTGA TGCTGTTCTT AATATCGCTG AGTGTTGTCT GATGCCTTCA AGTCATCCCA AAAAGGAGGA TGATAGTGTG GCTGTTGTAT GGCGTAATGA AGGCTTTGAT GATTCTCCAG TCAATCAAAT GACATTAAAA AAACTCCGCG AACAAGTAAT GTTGGTGGCA AATGCGATAG GTGGAAGTTT TGAAAAGGGT GACACAATTG CAATCGATAT GCCAATGACA GTCGATGCAG TGATTATATA TCTCGCAATC ATATTAGCTG GTTGCATTGT TGTTTCCATC GCAGACAGCT TTGCAGCTAA AGAAATTGCA ACACGGTTGA AAATTTCTAA AGCAAAAGGC ATATTCACTC AGGATTACAT ACTCAGAGGA GGTCGAAGAT TTCCTTTATA CAGTCGGGTG GTTGAAGCTG CTCCATCTAA GGTCATTGTC CTCCCAGCTT CAGGTAAATT GCGCGTTCAG TTAAGAGAAC AGGATATATC ATGGATGGAC TTTCTTTCCA ATGCGAAAAC CCATCTTAGT GGAGAGAACT ACTATCGTCC GATTAATCTA CCTGTAGACT CTGTGATTAA CATTCTCTTC TCATCTGGAA CTACAGGTGA ACCGAAAGCT ATACCGTGGA CACAGCTCTC GCCAATTCGT AGTGCATGTG ATGGATGGGC ACATCTTGAT GTCCAAGTGG GTAACACATA TTGTTGGCCT ACAAATCTTG GATGGGTAAT GGGACCAACT CTTATATTCT CCTGCTTTCT AACCGGTGCA ACACTTGCTC TCTATCAAGG GTCTCCTCTT GGACGCGGTT TTGGAAAGTT TGATGCTGGA GTTATGGTTC TTGGTACTGT TCCGAGCTTG GTGAAAACTT GGAAGAGGAC AAACTGTATG GAAGGGCTTA ATTGGACAAA GATTAAGTAT TTCGCCACTA CAGGAGAAGC TTCCAATGTT GATGATGTTC TCTGGCTTTC TTCTAAAGCT TATTACAAAC CTGTGATCGA ATGCTGTGGA GGCACGGAAC TCGCTTCTTC ATACATCATA GGAAGCCCGC TTCAACCGCA GGCTTTTGGA GCGTTTAGCA CACCATCCAT GACAACTAGA ATCATCATCT TCGATGAAAA TGGCGTCCCA TATCCGGATG ATCAACCATG TACTGGAGAA GTCGGTTTGC TCCCCCAGCA CCTTGGGGCC ACGGATAGAC TTCTGAACGC AAACCACGAC GAGGTTTACT TCAAGGGAAT GCCAATGTAC AAGGAAACAA GACTTAGAAG ACACGGTGAC ATCGTGAAGC GAACCATAGG AGGATATTAC AATGTTCAAG GCAGAGCTGA TGATACCATG AACCTTGGAG GCATTAAGAC GAGTTCTATT GAGATTGAAC GGGTGTGTGA TCAAGCTGAT GAGTGCATCT CTGAGACAGC TGCAGTCAGC TTAACACCAC CTAACGGTGG TCCAGAGTTG CTGGTCATAT TCGCCGTCTT GAAAGAAGGG TTCAAGAAAC AGAGTGAGGA AGAGCTAAAG ATGAAATTTT CAAGAACCAT TCAAAAAGAT CTTAATCCTC TCTTCAAGGT GAGTTTTGTG AAGATTGTGC CAGAGTTTCC AAGAACAGCT TCTAACAAGT TACTGAGAAG AGGTGGTCTA CATAATGTTT CTTGGTTTCA GTTACTTCCG AGTGAAACTG AGCTGAATCC TGGTTCTGAT AGAAGTTCAA GAGCTGAGCA GAATGATGTT GCAACATATC TTGTGCTTTC CTCTCATCTA CGGTTGCAGA AGGAAGGGTT TCTTACCACT TGGACCAATT CTTTTGTTGG ACCTTGGGAT CCATCTCAAG GTTTATATAA CCCTGATGAA AAGATTAAGC TTTGGCTTTT TCTACCTGGG CGTCATTCAT CAATCACTGA TAAAGCTCAG GCTGCTGTGT CAAAGCTTAG AGTGAACATG CCTGTTGTCT ATGCTTATCT TGTTGTTGCG TCAGGAATTT GGGTAGCACC TGGGGACTCT GAAGAGATAT CAGTTGCCTT TTCACAGTCT TTACGTAATT GCATTGAAAG AGCATTATCT GGACTTTCCT ACATGAGATT TGGAGATGTG TTTTCAAAAT TCAGCCCTCA AAGCGAAGAA TATTTGAGGA GGGGACAGCC TACTGTTGAA TTCATCTTTG CTGCTACCGA AGAGGCAGTT TTTGTCCATG TCATTATATC TGCCAAGAAT GTCCGCACAC TTTCAAGTGG CGATGCTGAA AGAATGTTAA GGAGTTCTTT GAAAAACTCC AGTTATAGGC TTCCAGAGCT TTTCTGTAAT GTTTGGGGTT GGCCAAGAGT GGGGATAATA GATTATGCTA CATATGAGAG CTTTTTATTT GATAGAAACA CTTCTCACAG GCTTATGTTA TTCCCACCAG TGATTGTTTC TCCTCATGGA ATGCGGGGCA GCCTCACTGG ATTCTGTCCC AATGACCTTG TCAAGCAAGT CTACTTCAGT TCTGGAAACT TAAGGACTTC GAGTGGATAT GTTGGTCGTG GGTCCCGTCT GATAAACGGC AATCATTGCT ACGTGGAAGT TAGACTTGGT TGCTGCCAAA ATAAAAATGA CAATAAAAAT GACAACACAA GTCAAGCTAA TTCGAACTTT GCAGTTAACT TGCCCCATAA TCAGTGTCCT GAACCTTCAG TTGGGAGTAA AGATCACCGT AAAGGACAAC CAGATCTTTT ATCAGTTTGT GAAAAAAAGT TCATTTATCC AGCTGAGGCA GTGCTTGTGC CAATCTTACA GTCGGCATTT GCTAAATTTT CTTTGAAAAG GGCTGGTGAT TTTGACTTCC TTGGAGCGTC TGAAAATAAG AGTGATGGGT TTTATGAAAA GAATGATTAC AATAGCAGTG GTAGTAGCCG TAATAGCAGC ATTAGTTCAA CAAGTAGCGC TTCCAGCGGG AGTGGCTGGA GGATGACGTC AAGAACTGGT GACCTTGACG CTGATGCAGA TTCTTTGACG TGTAGGCAAT CTGGTCTTAC TTCTAATGAT GATCGCCCAA AAATGGGTTC CAAGCGGCCG CGAACAGGGA TGGCAGAGTC ATTCGGTCAA GTAGGCATTG AAAATGATCA AATTGGTTGG GATTGGGATG CTGACGATGA TGATGATGAC AGAGAAGTTG GCATGGATAT CAAGGCCCTT CTTTCAGAGT TTGGAGACTT TGGTGACTTC TTTGAGAACG ATGCTTTGCC TTTCGGGGAG CCACCGGGAA CTGCAGAGTC GCATGCGCTC ATTTTCCCTC CAGATTCTGC TGATGTAGGT TCCAGTCCAG TGGATATGAT GGATGTATCA GACCAAATCG TTTTGCCTGT CGGGTTTTCC TCTTTTGAGA GCTTTAATCC TGTTCCCCCT ATCATTGATG AGTGCCTTAT TAAAAGTCAA GAAGTTCTCA ACAGCAGTAT CACTTCAGTT CCTTCATATC AAATGTCGAT CTCTTCCACT AGTGAGTTCG ATCATTTAAT GAAAGCAGAG GCGATGATGA CCTTCGCTCC TGAGTATGGA GCTGTAGAAG CACCTATGAG CGAGATTTCC TCGACGTATT TCAAAAGCCC ATATCTTCCC AAATCTCATA AAGTGGAGAG TTCAAATTCA AGAACGAGTA ATTATGTTTA TGGAGCCACG CCACCTACCA CTGATTCTGA TGGAGCGGGC AATAAGATTT TGTTTGGATC AAAATCATGC ATTGGTAACA ATGATGGCAG AACTTTGTTT CATTCGAGGG AGCATTACAC TCAAGTAGAG GGTAGAAATG ACCAACATGA TAAGCTACCT ACTGTTGTCA GTGACAACAA TAGTACAAAG GAGGGTGTCT CTCATTCAAA ACACTCAAAA CATAGTGCTG CGAATGCTGT TAAGGTCGTG CAGGGGAAAA AGACTGATGG TATATCTGCT GTTGTTAGAA CCTTATTATC TTCGAAGACC TTGCTGGCAA CAGACGTGGG AAACGTTATG TTCCAAGCTT TCATGTGTAG GGTGCGGCAC ACTTCTTTAA AGCACAGTTC ACCTGTTAGT CTGACTAGGC TTAGCGGAAA TTTTTTCCTG AACCAGCTGC CAAATGAGCC TAGTACTCTG ACAGACAACA TATCTGCAAG GAACGAGATA TATAAGAAAG ATATACCTAC CAGAATTGCT GGAGATTTTG ACGGAGGAAT GTTGGATAGC CACATGAGTG CACCAGTTGG TGTATGGCGG ACTGTTTCAG TCCCAAAAAC AGCAAAACCT GCTAGTTCGC CAAATATTGA AGCAGGGTCA TCCTTGCCCC ATAGTTCATT TAGCGAAGAC AGCTTACTTT CTTATGGTCA AAGGCAACCT CTGCATGAGC TCCTAGATGG AATATCGCTA CTTGTACAGC AAGCTACCTC TTTTGTTGAT TTAGCTCTGG ATTCAGATTG TGGAGATGGA CCGTATGGCT GGCTTGCATT GGAAGAGTTA TGGAGACGGG AATTGTCGTG TGGACCCTCT GCTGGCCATG CAGGTTGTGG GGGAACTTTG GCTTCCTGCC ATTCTCTGGA CATTGCTGGT GTCAAGCTAG TTGATCCACT CTCTGCTGAG GTTTTCCCTT CGTCTGTCAC TACTCTACTG CAATCTGACA TCAAAACAGC TCTGAAATCT GCATTTGGTC AGTCAGATGG TCCATTATCT GTGACAGATT GGTGCAAGGG CCGAAATCAA TCGGGCGATG GAGGATCTAT TTCTGAGGGA TCTACTTCTG AGTCAGCCCT GAGTGAAGTG AATGGTGTCA AAATCTCTGA TGTGTCAAAT GCAATAGATG GTGGGAAAGG AGAGGAGACG GCTCAGAGCC TAGACATATA CAGTTCAGAA TTACTCCGAC CGACATTGTT TGTTCTTCCA TCACCTGCTA TACTTGTCGG GTACCAAGAT GACTGGCTTA AGATATCTAC AAACTCCTTG CCACATTGGG AAAAGGCCCC GTTTGAGCCA TATGCTCTGC CAAAAAGTAT TAACTATACT GTTGTATGCC CAGATATTGA TCCTTTAACT TGTGCTGCTG CTGATTTCTT CCAGCAACTT GGAACTGGTG AGTCAACGAG TTTATCTATT GTGAAAGAGG TTATGCTCAA ACATGATAGG AACTGGCTGG GAACCCATTT GCCACAGAGC CTGGGAAATC AAATGGATAC GGACGCTGGA AGATTATCCT CATCTGGATT TGTTCTGCTT GATTGCCCTC AATCAATGAA GATTGAAAGC AATAACACAT CGCTTCTGGG ATCTCTCAGC GATTATTTTC TATCTTTGTC AAATGGGTGG AATGTGAGTA GCTATCTGAA GTCTTTATCA AAAGCGCTGA AAGGTCTAAA GCTTGGATCT TCCCTTTACA CAAACCAGAA AGAAGGATCA GGAAGTCCTT GTATGGTAGT GTACATAGTG TGTCCATTTC CTGATCCTTC AGCAGTTTTA AGGACGATCG TCGAATCGTC TATAGCACTT GGATCAGTAA TACAGTCAGA TAGAGAGAGG AGATCAATAC TCAACAGTCA GGTTGCAAGG GCGTTTGGTA GTTCTACTGC TGTTGACGAA GCATCAATAT CTCACATTCC AGTGCTTTCA GGGTTTAGTG TCCCCAAATT AGTTCTACAA GTGGTGTCGG TTGATTCTAT TTTCCGGATA ACAAGTCCAA GCTTTAATGA GCTTGTCATT CTCAAGGATA CTGCTTTTTC TGTATACAAT AAAGCTCGGA GAATTTCACG AGGAATGCCT AATGATGCAA TTTTCTCATC ATCTTTATCA AGCAGATCCT CTTCAGCGTT GACATCAATG AGCTCTATTT CAGGAATCTG GAAAGACTGC GGTGGTTCTC GAATGACAGG TTCTACACAT CCAAGAGATG GTGACATTGA TGTTAGCTTG AGAACGAGTG GTTGGGATAC CTCTACTTCC TGGCAAATAC CAAGATCTGG AGGACTAAGT TGCGACCCAA GCAGAAATGG AGATTTTTAC CTTAATGATG AAATTTTCTA TTTATTTGAA CCACTTTTCA TTCTTTCCGA GCCTGGTTCT GTGGAGCGTG GAGTTTCACC TACTTTCGGC AGCTTGGGTT CTGAGTCTTC CAAGCCAATT CCCGAGGATG GTGGCAGAGG TTCTGGACCT GGCATGAATT CAATGGAAGG TATAACATCG GGATCAAGCT CCCAGGGGGA TGCATCCCAG CTTGAAGGAA AGGCTATTCC AAGTTTACAT TGCTGCTACG GTTGGACTGA GGACTGGAGA TGGCTTGTAA GCATCTGGAC GGATGCCAGG GTTCTGCAGC AGGGATGTCA AATACTACAG GCGTGTTCCT CCCCTGACAA TGGATCTTTC AAACCCAGGG ATTTTGTCAT TACACGCATT GGGAATTTCT TCGAGCTTGA ATACCAAGAG TGGCAAAAGG CTATTTACTC AGCTGGAGGT CCTGAGGTTA AAAAGTGGCC TATTCAACTG CGACGTTCTG CGCCTTCTGG CATAGCCACC AACAGCAACG GATCTTCCTT GCAACAGCAG GATCTTAGTC TGATTCAAGA GAGAGCCTCA TCAACTAGCA CACTTTACAG CTCTCATTCA AAACCATCCA CCTTTGTGAA AGGCAGTATT GGGCAATCTG CTGGAAGAAA GCAGATAATG GGTGGGCAAA CCATATCTGG TACTCCAAGG GGATTGTTTC AGTGGGTTCA TAGCATCAGT TTTGCTTCTG TTTCACTTGA TCACTCCCTA CATTTTGTTC TTCCAGCTGA GTTGGTGTCT GCTGACACTG ACTTGCATGG TTATATGCAC AATTATGCAG GAGGTGGCCA GAGCAGTACT GGTATGAGTT CTGTTAATTA CATTGAAGGT TTCACTCCTG TCAAGTCTCT TGGGTCGACC GCTTTCTCTT ACATGATGAT ACCATCACCC AACATGCGCT TTCTTCACCC AAGTCCTCTT CAGCTTCCTA CATGTTTAAC TGCCGAGTCA CCTCCACTTG CTCACCTCCT TCACAGCAAA GGCTGTGCAA TCCCCTTGTC TACTGGATTT GTTGTTTCAA AAGCTGTGCC TTCCATGAGA AAAGACTCAA GAATAAACAT GAAAGAAGAA TGGCCATCAG TTCTTTCTGT AAGTCTCATA GACTATTATG GTGGTTATGA CAATGCTCAT GACAGAATTC TTCAGGGAAT CATGAAGCAG GGAGGAGGGA CCAAAGAAAC TAGAGATTTT GAGGTTGAAA GCCATCTTAT CCTTGAGTCA ATTGCGGCAG AACTCCATGC TCTATCATGG ATGACTGTTA GTCCAGCATA TCTGGACAGG CGGACGGCAT TGCCGTTTCA CTGTGATATG GTTTTGAGAT TGAGACGTCT GCTTCACTTT GCGGACAAAG AACTAAGACA GGAGTTTAAA ACAATGCAAA AGAATGCAGA TCACTAA 
Length7917
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27775565.. 27788984
Download Sequence
A.thaliana
AGI-codeAT1G55325.2
DescriptionRNA polymerase II transcription mediators
TAIR curator summaryEncodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.
Alias[GCT][MAB2][GRAND CENTRAL][MACCHI-BOU 2]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg482629 demeter-like 1
3.4641 Ahg928298 Rab escort protein
5.09902 Ahg475250 ATP-citrate lyase A-2
10.247 Ahg933722 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
11.5326 Ahg493620 proteasome alpha subunit A1
17.8885 Ahg921503 ARM repeat superfamily protein
24.7386 Ahg945524 detoxifying efflux carrier 35
26.1534 Ahg478929 Lactate/malate dehydrogenase family protein
28.775 Ahg484168 cullin-associated and neddylation dissociated
30.2985 Ahg473368 Formin Homology 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression