| Annotation |
|---|
| Description | jgi|Araly1|482629|fgenesh2_kg.4__1689__AT2G36490.1 |
| Sequence |
ATGGAGAAAC AAGGGAGAGA AGAAAGCAGC TGTCAACAAC CTCCATGGAT TCCTCAGACA CCCATGAAGC CAATTTCTCC GATCTGCCCA TACACGGTGG AGGAACAATC TCATCGGAAT CAAGTGGAGG AAAGGAGATT TGTTGGGAAC AAGGACATGA GTGGTCTTGA TCACTTGTCT TTTGGGGATT TGCTGGCTCT AGCTAACACT GCATCACTCA TATTCTCCGG TCAGACTCCA AAACCTACAA GAAACACAGA GATGATGCAG AAAGGTAATG AAGAAGTGGA GAGTCTGAGC TCAGTGTGTA ACAATGTTGA TGAACAGATC ATCAAGACTC CTGAAAAACC AAAGAGGAAG AAGCATAGAC CAAAGGTTAT TAGAGAAGCT AAACCCAAGA GGGAGCCTAA ACCACAAACT CCGAGGAAGT CTGTTGTTGC TGAGGGTCAA GAAACCAAAA CGCCAAAGAG GAAATATGTG CGGAAGAAGG TGGAAGTCAA TAAGGATCAA GTGTCTACTC CGGTTGAATC ATCAGCAGCT GTAGAAACTT CAACTCGTTC TAAGAGGCTT TGTAGACGAG TCTTGGATTT TGAAGCCGAA ACCGGAGAAA ACCACTCCAA CAGTGACATT AGACAAGCAG GTGAGATGGA ATCAACTCTA AAAGAGAAGC ATTTAGATTC TGGGAATCAA GAATTAAAGG ATAGCTTTCT TTCGGCGCCT AGCACGCCAA AGAGAAAGCG CAGCCAGGGT AAAAGAAAGG GAATTGAACC AAAAAACAAT GGCAGTAACC TAGAAGAAGT TGATATTTCG ATGGCACAAG CTGCAAAGAG AAGACAAGGA AAAGCAACTT GTAGTGACAT AAATCTATCA GGGATTCAGT ACGATGAGCA ATGTGACTAC CAGAAAGTGC ATTGGTTGTA TTTCCCGAAC TTGCAACAGG AAGGGATTAG ATCTGATGCC ATATGCAGCA AAGCATTCAC TGGACAACTA CACAAGGATG TTTCTGCCTT TCACGCTAAG TTCTACAGTT CAACATCTCA GCCCAGTGCT AATAGAGTCC TAACCATTGA AGAAAGACGA GAAGGTATCT TTCAAGGAAG GCAAGAGTCT GAGTTCAGTT TTCTCTCGGA TAAGATAGAC ATGCAGATAA AGAAGAGAAC AGGCCATGCT CGTTTCCGGA ATTTGTCTTC CATGAATAAA CTTGTGGAAG TTTCTGAGCA GTTATCCTCA GGATGTTATA GCAAGCCACA GCAAAATAAT AAGATTCTTG TTGATACACG GGTGACTGTG AGCAAAAAGA AGCCAACCAC TAAGTCTGAG AAATCACAAA CCAAACAGAA AACTCTTCTT CCAAATCCTT GCCAGTTTCC AGCTTCATTT TCTGGTCTTT CTCCAGATGA ACTTTGGAAA CGACTTAACT CGATCGAAAC AATCAGTGAG CAATTGCGTC TATTAGACAT CAACAGGGAG AATTCTGAAA CTTCTCTCGT TCCTTACTCA ATGAGAAGCC AAGGAAACCA GATTACACTC TTCGGCGGTG GCGCTGGAGC AATTGTGCCT GTAACTCCTG TTAAAAAACG ACGCCCACGA CCAAAGGTTG ACCTAGACGA TGAGACAGAA AAAGTGTGGA AACTGCTATT GGAGAATATT AATAGTGAAG GTGTTGACGG GTCAGACGAG CAGAAGGCGA AATGGTGGGA GGAAGAACGT AATGTGTTTC GAGGAAGAGC AGACTCATTT ATAGCACGGA TGCATCTTGT ACAAGGGGAT CGACGTTTTA CGCCTTGGAA GGGATCCGTT GTGGATTCTG TTGTTGGAGT ATTTCTCACT CAAAATGTTT CGGACCATCT TTCAAGTTCC GCCTTCATGT CGCTCGCGGC GGAGTTCCCC GCTCCTTCAA TACCCAGCAG TAACTTTGAC GTTGGAACAA GCTCGATGCC TTCTATTCAA ATAACGTACT TGGACTCAGA AGAATCGATG TCAAACCCAC CCGATCACAA TCAGAGTTCT GTTATTCTAA AAAACACACA GCCTGATGAG GAGAAGGAGT ATGTACATAG CAATGAAACC TCCAGAAGCA GTAGTGAGAT TGCCAGCTCA GCCCATGAAT CAGTTGGCAA AACCACGGAT TCAAAGACGA ACGTGGATTC AGATCAAAAA GGCTCAGAAG TTGATAAGAC AGATCATAAG GGCCTAGTTC TAGACCTGTT TCCATCTGAA GATTCTGCAC TTACATGTCA ACATTCGATG GTTTCTGATG CTCCTCAACA AAATACAGAG AGAGCAAGAT CAAGCTCAAC CTCAGAGATC AACTTAGAAG GAGAGTATCG TACTTCCTAT ATGAAGCTCC TACAGGGGGT ACAAGTCTCA CTAGAAGAAT CCAATCAGAA GAACCAGTAT GACAATTCAG GGCAAGAAAT TGGTGTATCA CCAAATATGT CTCCCGGTGA TTGTAGCTCA GAAATTAAGG ATTTCCAGTC ACTGAAAGGA CCCACAAAAT CTTCTGATGA TAGTAATGAA CCATGTTGTT GCTATCAGCA AGATGGGGAT GTTTTGAGTT GTCAGAAACC TGAGATGCCT GAAAGCTCGA CTAGCACTTT GATTCCAGAT ATTAATGAAA GCACGAGTAT TCCTGATGTC CAAGAAGCTA AAGGAAAAAA GGTTTTGAAG GAGAAGAAAG AGGCGTTTGA CTGGGATAGT TTAAGAAGAG AAGCACAAGG TAGAGAAGGA ATAAGAGAAA AAACAGCAAG GACAATGGAC ACTGTGGACT GGGAGGCAAT ACGAGCGGCC GATGTTAGTG AAGTTGCTGA AACAATCAAG AGTCGCGGGA TGAACCATAA ACTTGCAGAA CGAATACAGG GCTTCCTTGA TCGACTGGTC GATGACCATG GAAGTATCGA TCTTGAATGG TTGAGAGATG TTCCACCCGA TAAAGCAAAA GAATATCTTC TGAGCTTTAA TGGTTTGGGA CTAAAAAGTG TGGAGTGTGT GCGGCTTCTA ACACTGCACC ATCTTGCCTT TCCAGTTGAT ACAAATGTTG GGCGCATAGC CGTTAGACTT GGATGGGTAC CCCTTCAACC GCTCCCAGAG TCACTTCAGT TGCATCTTCT AGAAATGTAT CCTGTTCTCG AATCTATTCA AAAGTATCTT TGGCCTCGTC TCTGCAAACT CGACCAAAAA ACATTGTATG AGTTGCACTA CCAGATGATC ACTTTTGGAA AGGTGTTTTG CACAAAGAGC AAACCTAATT GCAATGCATG TCCCATGAGA GGAGAATGCA GACATTTTGC CAGTGCGTTT GCAAGTGCAA GGCTTGCTTT ACCCAGTACA GAGAAAGGTA TGGGGACACC TGATAAAAAC CCTTTGCCTC TGCACCTGCC AGAGCCATTG CAGAGAGAGC AAGGGTCTGA AGTAGTACAG CACTCAGAAC CAGCAAAAAA GGTCACATGT TCTGAACCAA TCATCGAAGA GCCTGCTTCA CCGGAGCCAG AAAGCGCACA AGTATCAATA GCTGACATAG AGGATGCGTT TTTTGAGGAT CCAGAAGAAA TTCCTACAAT CAGGCTAAAC ATGGATGCAT TTACCAGTAA TTTGAAGAAA TTAATGGAAC ACAACAAGGA CCTTCAAGAC GGAAACATGT CCAGCGCTTT AGTTGCACTT ACTGCTGAAG CTGCTTCTCT TCCAATACCT AAGCTCAAGA ATATCAGCCA GTTAAGGACA GAACACCAAG TTTATGAACT TCCAGACGAG CATCCTCTTC TAGTTCATTT GGAGAAGAGA GAACCTGATG ATCCATGTTC TTATTTGCTT GCTATTTGGA CGCCAGGTGA GACGGCTGAT TCTATTCAAC CGGCTGTAAG TAAGTGTATA TTCCAAGCAA ATGGTAAGCT TTGTGATGAG GAGACTTGTT TCTCCTGCAA TAGCATCAAG GAGGCGAGAT CTCAGATTGT GAGAGGGACT ATCTTGATTC CTTGTAGAAC CGCGATGAGG GGTAGTTTTC CTCTCAATGG AACCTACTTT CAAGTAAACG AGGTTTTTGC GGATCATGCT TCCAGCCTTA ACCCAATCGA TGTCCCAAGG GAATGGATAT GGGACTTACC TCGAAGAACG GTCTACTTTG GTACCTCTAT TCCAACGATA TTCAAAGGTT TACCAACCGA GACGATTCAG CAGTGTTTCT GGAAAGGGTA CGTATGTGTA CGAGGATTTG ATCGAACGAC GAGAGGACCG AAGCCTTTGA TTGCAAGATT GCACTTCCCG GCGAGCAAAC TGAAGGCAAA CCAAGCTAAC CTCGCCTAAT CCGTAGGCAA GCAAACAAAT ACAGCTTCTT ATGGTTAGAG AGTGAAAGAG CACACTGTAC CAATCTAGTT AATGTAAGAA AGTGAAACGT CGAGTTAACA GTCCTAGAGT TGTAAAAGGT TTTAAATCCC ATTTTAGTTT CGTCTTAATT T |
| Length | 4451 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 16441146.. 16453586 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G36490.1 |
| Description | demeter-like 1 |
| TAIR curator summary | A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts. |
| Alias | [DML1][ROS1][demeter-like 1][REPRESSOR OF SILENCING1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg922878 | SEUSS transcriptional co-regulator |
| 2.23607 |
Ahg903463 | Homeotic gene regulator |
| 2.44949 |
Ahg314757 | RNA polymerase II transcription mediators |
| 3.4641 |
Ahg493698 | auxin response factor 8 |
| 7.34847 |
Ahg484168 | cullin-associated and neddylation dissociated |
| 9.94987 |
Ahg930843 | DNAJ heat shock N-terminal domain-containing protein |
| 18.1659 |
Ahg335224 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 18.1659 |
Ahg481718 | Argonaute family protein |
| 18.9737 |
Ahg470295 | FZO-like |
| 20.1494 |
Ahg904230 | varicose-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|