| Annotation |
|---|
| Description | jgi|Araly1|315930|fgenesh1_pm.C_scaffold_2000963 |
| Sequence |
ATGGATCATA ACTCGCCGAG ATCTCGTCGG AGCCGGAAAC CGGAGCCCAA ACCCGACATA TACTCCACTT TCGTAGTCCA CTCCGACTCC GATTCTGATC AAGGTCGAAA TCGAGATAAA CGTAAAGCCA AACCTGAGGA AGACGAAAAT GTCGATTTAT ACGCTACAAT GGTTTATAAA GGCGATAGTG ACGGAGAAGG AGAGGAAGAC GATGAAGACG ATTCTATGCT TCCTCCTCTT CTCAAGCGTC TTCCCAAAGA TTTCGGAGGC GGCGCGTCGC TCGATTACGA CGACGACGAC GGTGACGAAA CCGGAGATTT CGGTACGATG ATTGTGAAAA CAGATCGGAG TAGTCATAGT AAGAACAGTC CGTACTCGTC CAAACCGCGA ATGGGAGTTA GTCCTAGGAG GAGAGCGAGA GGTGGAGATG AGGAATCTTC CGATGAGGAA GACGAAGAAG AAGAAGATGA TGATGATGAC GGAGAGTACG GTACGTTTGT TGTGAAATCT TCGTCTAAAA AGGGAAAGAA TAAAGAGAAG GAGATTGATA TGTCAACTAT GGGAAGAGCT GTTGCGAGTA TGCAGAAATC AAATTTTGGT GGTAAGACTC GGAAATTGGA TCCTTCCTCT TCTTCTTCCA AGCTTCACGG TGAAGATAAT CGGAAAATGC AGCAGCAGAA CAGTAAGATG TCGACTACGT CTCTTCCGGA TAGCATTACT AGAGAAGATC CAACCACCAA ATACGAATTC CTCAATGAAC TTGGGAAAGG ATCATATGGA TCTGTATACA AGGCAAGAGA TTTGAAAACA TCGGAGATTG TTGCTGTGAA AGTCATATCA CTTACTGAAG GGGAGGAGGG ATATGAAGAG ATCCGGGGAG AAATTGAGAT GCTGCAGCAA TGTAACCATC CGAATGTTGT CCGCTACCTT GGGAGTTACC AAGGAGAAGA TTATCTTTGG ATAGTGATGG AGTATTGTGG AGGTGGAAGT GTTGCTGATC TTATGAATGT TACTGAGGAG GCGTTGGAGG AGTATCAGAT AGCATATATA TGTCGGGAGG CGTTGAAGGG CCTTGCATAC TTGCACTCAA TTTATAAAGT CCATAGAGAC ATTAAAGGTG GAAATATCTT GTTAACTGAA CAAGGAGAGG TCAAGTTGGG TGACTTTGGG GTTGCAGCTC AACTTACGCG GACTATGTCG AAGCGAAACA CGTTCATTGG GACTCCACAT TGGATGGCCC CAGAGGTTAT TCAGGAAAAT CGTTATGATG GGAAGGTGGA TGTATGGGCT CTTGGTGTTT CAGCTATTGA GATGGCAGAG GGGCTTCCTC CAAGATCAGC AGTTCATCCG ATGAGGGTTT TGTTCATGAT ATCCATCGAG CCAGCTCCGA TGCTCGAGGA TAAAGAAAAA TGGTCCCTGG TCTTTCATGA TTTTGTTGCA AAGTGCCTTA CAAAGGAACC ACGTCTTCGC CCAACTGCAG CTGAGATGCT TAAGCACAAA TTTGTTGAGA GATGTAAAAC TGGGGCTTCC GCAATGTCGC CAAAGATTGA GAAGTCCAGA CAAATCAGAG CTGTAATGGC TCTGCAAGCG CAAAGTGTTG TCGCACCTTC TTCGGAGGAC ACTTCAACAC TGGGTCCAAA ATCAAATGAA GAGGTAGGAA TTACTGTTCC ATCTAAACCT CCTCAAAATT CCACCGAAGC ACCTCTAACC GGCACCCTGA ATCGGCAGCA TATAACTGGC AACACTGTGT TGGCTGGAGA AGGCAAGTAT TATATGCATG CGTATCTATG TGGTGACTTT GGAACTATGA TCGTTCATGG TGAGGATGAG GCAGAGGAGA GTGACTCCAG GTCTCAACTT GTCAAAGAGA AAGAAGAATC TTCATCTTCT CAGGTTGAAG GTGTTTCTCG CGAAGTCTCA GGAGAAGAAT TACCTGACTC ATGGATACAT GACAAAAAGA ATCCTCCGGC TACCGATCTT CCAGTTGAAG CTTCGACTTC ACAGAGTATG CAGGCAAGTT CATCTCATGA GCATAGAACC AAGCTAAATA ACATAGCTGG AATACAGACC GAAGGTGGCA GTGATGCAAG TGGTAGTACC TTGAAAAATG AAACTGTTGG CAGGAAAGCT TTTGCTTTGC AAGATAAGTT ATGGTCAATC TACGCAGCTG GAAACACAGT ACCTATACCA TTCTTGAGAG CAACAGATAT ATCCCCAATT GCACTCTTGT CAGAGAACAT GATCGGAGGC ATGCAACAAG ATGGGAATGG AACTGTAGCC GTCGAAGCAC TTCAGGAGCT CTTCACTTCT GATCCCCAAT CCAGAAAGGG TCGACGTGGA CAAAACGAGA TGCCTCTTCC TCCAAGCGTA TACCAAAGAC TGACAACAAG CTCTTCTCTA ATGAATCTTG CACAAGTTTT AGCATACCAC AGAGCGTACG TGTTACGAGG AAATGCCGCT GCAGGAATTG CAAGCAACGC AGGAGCAGCA AACCATTCAA AATCTATGCG ATACTCTTCG CACTATCCTC CGCCTCTAAG TATTTCTATG CAATTTTCTT CTTCCTTACT ACTTCAAAAG ACGACTCCTC CTCGCTATTT TCCTTTCTCT TCTTCGATCT CTAGGTTTTC TTCTTCGTCT TCTTCTCCTT CTCCTTCAGT TCGACCGCCA AAATCCGCCG GTAGTAATGG CGACGAAGAA GACACTTTTG AATATAAAAC AACTGATGAT GTTGAGGTCA TAGAAGATTG GGAAGAAGAA GAAGATGAGG AAGTTGAATC TTATCTTGGT GACGGAGGAG ATGGTGGTGG AATTGTTCTT CGAGATGTGC CATGGGGTGA AAGAGTTCTT TCTATTGCTG CAGAAGTTTT GAAGCAGTCT GAGGAAGATT TGGAATTGTT TGCTTTCAAA ACTTCACCGC GTGGATATAT ATATGTCAGA CTAGACAAAC TCTCGAATGA ATATGGATGT CCTACCATGG ATAAGCTTGA GGAATTTAGT CGAGAATTTA AGAAAAGACT AGATGATGCT GGGGCTGCAA AACTAATCCC AGAGGATCTA GCCCTTGAGG TAAAAAGAGT CTTTCTCCAT GAATCAACGA CCACTCAGGG TCAATTTGTT CTAAATCTTG TGTCCGTGTT GTTTTTTTCT GTAAAGGTGT CATCTCCAGG AGCTGAGAGG CTGCTGAGAG TCCCAGAGGA CTTACCCCGA TTCAAGGATA TGCCAATGAC AGTAAGCTAT GTAGAGGAAA CCAACTCGAG GAAAGTAGTG AAAACTGCAG TGTTTCTCTT GGAGTCTATC GATGCAGAAT CGGATAACTG TGTCTGGAAA TTAGCAGATG TGAAGGAGAA CAGAGATCCC GAAAGCAAAG GCAGACCGTT AAGCCGGAAA CAAAAGGACT TGAGAATCAC ACTGCCTTTC ACAGATCACA GGAAGATAAA TCTCTACTTG GATTAG |
| Length | 3456 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12835995.. 12843767 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G69220.1 |
| Description | Protein kinase superfamily protein |
| TAIR curator summary | Encodes a putative serine/threonine kinase (SIK1). |
| Alias | [SIK1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.27362 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 13.4164 |
Ahg950201 | beta-1,2-xylosyltransferase |
| 16.0935 |
Ahg935720 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| 16.5831 |
Ahg482652 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
| 16.9706 |
Ahg476894 | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) |
| 17 |
Ahg492634 | Alkaline phytoceramidase (aPHC) |
| 18.5742 |
Ahg950166 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
| 21.3542 |
Ahg472958 | |
| 28.3725 |
Ahg486867 | |
| 28.6182 |
Ahg495420 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|