| Annotation |
|---|
| Description | jgi|Araly1|487099|fgenesh2_kg.6__233__AT5G03280.1 |
| Sequence |
TCTCTCTCTC TGGATGGAAC TGAGCTCTTT CTTTCTCTCT TTCCTCTTGT TTTCTCTCTC TATCTCTCGT GGCTTGAAGA TCCGTTTCTC TCTCTCTCAC TGAGAATATT GTTCTTAGGT CAACTTGCGA TCATGGCGAT TTCAAAGGTC TGAGGCTGAT TTCGAATGGT TTGGGGATAT CCGAATTAGT TAAGCATATG GAAGTCTGTG TTCTGCTCTT GGCTGCTCTA TTAGGGCTTC CTCCATTTGG ACCAACTTAG CTCATGTTGT ATGGTCTCTC TCCTTAACTT AGCATTGGTT ACTAGAGGAA ACTTCAGCTA TTAGGTAAAA AAAGACTGTA CAGAGCTGTA AAACAAGACA GTGTTAGAGT GGCTTTATTT GCCTCAGTGT TATTTTGACA GAAGAACCGA CTGATTCGCT ACTGTGTGTG ACTTTGGAGG GAATCAAATT TACCAAGGGA AAGGTGTTTT AGATCAAATC TGTGAATGTT GAGTTGACCT TAAATCCTAC TCTGAGTAAT TATATTATCA GATAGATTTA GGATGGAAGC TGAAATTGTG AATGTGAGAC CTCAGCTAGG GTTCATCCAG AGAATGGTTC CTGCTCTACT GCCAGTCCTT TTGGTTTCTG TCGGATATAT TGATCCCGGG AAATGGGTTG CAAATATTGA AGGAGGTGCT CGTTTCGGGT ATGACTTGGT GGCAATTACT CTGCTTTTCA ATTTTGCCGC CATCTTGTGC CAGTATGTAG CAGCTCGAAT AAGCGTTGTA ACTGGTAAAC ACTTGGCTCA GATCTGCAAT GAAGAATATG ACAAGTGGAC GTGCATGTTC TTGGGCATTC AGGCGGAGTT CTCAGCAATT CTGCTCGACC TTACCATGGT TGTGGGAGTT GCGCATGCAC TTAACCTTTT GTTTGGGGTG GAGTTATCTA CTGGAGTGTT TTTGGCTGCC ATCGATGCGT TTTTATTTCC TGTTTTCGCC TCTTTCCTTG AAAATGGTAT GGCAAATACA GTATCCATTT GCTCGGCAGG CCTGGTTTTA CTTCTCTATG TTTCTGGCGT CTTGCTGAGT CAGTCTGAGA TCCCATTCTC TATGAACGGA GTGTTAACTC GGTTAAATGG AGAGAGCGCA TTCGCACTGA TGGGTCTTCT TGGAGCAAGC ATCGTCCCTC ACAATTTTTA TATCCATTCT TATTTTGCTG GGGAAAGTAC ATCTTTGTCA GATGCGGACA AGAGCAGCTT GTGTCAAGAT CATTTGTTCG CCATCTTTGG TGTCTTCAGC GGACTTTCAC TTGTAAATTA TGTATTGATA AATGCAGCAG CGAATGTGTT CCACAGTACT GGCCTTGTGG TATTGACTTT TCACGATGCC ATGTCACTAA TGGAGCAGGT ATTTATGAGT CCGCTCATTC CAGTGGTCTT TTTGATGCTC TTGTTCTTCT CTAGTCAAAT TACAGCACTA GCTTGGGCTT TCGGTGGAGA GGTCGTCCTG CATGACTTCC TGAAGATAGA AATACCCGGT TGGCTTCATC GTGCTACAAT CAGAATTCTT GCAGTTGCTC CTGCCCTTTA TTGTGTATGG ACATCTGGTG CAGACGGAAT ATACCAGTTA CTTATATTCA CCCAGGTCCT GGTGGCGATG ATGCTTCCTT GCTCAGTAAT ACCGCTGTTC CGCATTGCTT CGTCGAGACA AATCATGGGT GTCCATAAAA TCCCTCAGGT TGGCGAGTTC CTCGCACTTA CAACATTTTT GGGATTTCTG GGTTTGAATG TTGTTTTTGT TGTTGAGATG GTATTTGGGA GCAGTGACTG GGCTGGTGGT TTAAGATGGA ATACCGTGAT GGGCACCTCG ATTCAGTACA CCACTCTGCT TGTATCGTCA TGTGCATCCT TTTGCCTAAT GCTCTGGCTT GCAGCTACGC CGCTGAAATC TGCGAGTAAC AGAGCAGAAG CTCAAATATG GAACATGGAT GCTCAAAATG CTTTATCTTA TCCATCTGTT CAAGAAGAGG AAATTGAAAG AAGCGAAACA AGGCGGAATG AAGACGAATC GATAGGGCGA CTGGAAAGCA GGATAAAGGA TCAGTTTGAT ACTACGTCTG TTACTAGCCC GGTCTATGAT TTGCCAGAGA ACATTCTAAT GACGGATCAA GAAATCCGTT CGAGCCCTCT AGAGGAAAGT GAGTTGGATG TAAAATTCTC TACCTCTCAA GTTAGTAGTC TTAAGGAAGA CTCTGATGTA AAGGAACAGT CTGTAGTGCA GTCAACGGTG GTTAATGAGG TCAGTGATAA GGATCTGATT GTTGAAACAA AGATGGCAAA ATTTGAACCG ATGAGTCCTG TGGAGAAGAT TGTTAGTATG GAGAATAACA GCATGTTCAT TGAAAAGGAT GTTGAAGGGG TTTCATGGGA AACAGAAGAA GCTACCAAAG CTGCTCCTGC AAGCAACTTT ACTGTCGGAT CTGATGGTCC TCCTTCATTC CGCAGCTTAA GTGGGGAAGG GGGAAGTGGG ACTGGAAGCC TTTCACGGTT GCAAGGTTTG GGGCGTGCTG CCCGGCGACA TTTATCAGCG ATCCTTGATG AATTTTGGGG ACATTTATAT GATTTCCATG GGCAATTGGT TGCTGAAGCC AGGGCAAAGA AAATAGATCA GTTGTTTGGC GCTGATCAAA AGTCAGCCTC TTCTATGAAA GCAGATTCTT TTGGAAAAGA CATGAGTAGT GGATATTGCA TGTCACCAAC TGCAAAGGGA ATGGATTCAC AGATGACTTC AAGTTTATAT GATTCACTGA AGCAGCAGAG GACACCCGGA AGTATCGATT CGTTGTATGG ATTACAAAGA GGTTCGTCAC CGTCACCGTT GGTCAACCGT ATGCAGATGT TGGGTGCTTA TGGTAACACC ACTAATAATA ATAATGCTTA TGAATTGAGT GAGAGAAGAT ACTCTAGCCT GCGTGCTCCA TCATCTTCAG AGGGTTGGGA ACACCAACAA CCAGCTACAG TTCACGGATA CCAGATTAAG TCATATGTTG ACAATTTGGC AAAAGAAAGG CTTGAAGCCT TACAATCCCG TGGAGAGATC CCGACATCGA GATCTATGGC GCTTGGTACA TTGAGCTATA CACAGCAACT TGCTTTAGCC TTGAAACAGA AGTCCCAGAA TGGTCTAACC CCTGGACCAG CTCCTGGGTT TGAGAATTTT GCTGGGTCTA GAAGCATATC GCGACAATCT GAAAGATCTT ATTACGGTGT TCCATCTTCT GGAAATACTG ATACTGTTGG CGCAGCAGTA GCCAATGAGA AAAAGTATAG TAGCATGCCA GATATCTCAG GATTGTCTAT GTCTGCAAGG AACATGCATT TGCCGAACAA CAAGAGCGGA TACTGGGATC CGTCAAGTGG AGGAGGAGGG TATGGTGCGT CTTATGGTCG GTTAAGCAAC GAATCATCGC TATATTCTAA TTTGGGGTCA CGGGTTGGAG TACCCTCGGC TTATGATGAC ATTTCTCAAT CAAGAGGAGG CTACAGAGAT GCCTACACTT TGCCACAGAG TGCAACAACA GGGACCGGAT CGCTTTGGTC AAGACAGCCC TTTGAGCAGT TTGGTGTAGC GGAGAGGAAT GGTGCAGTTG GTGAGGAGCT CAGGAATAGA TCGAATCCGA TAAATATAGA CAGCAACGCT TCTTCTAATG TGGATGCAGA GGCTAAGCTT CTTCAGTCGT TCAGGCACTG TATTCTAAAG CTTATCAAAC TGGAAGGATC CGAGTGGTTG TTTGGACAAA GCGATGGAGT CGATGAAGAA CTGATTGACC GGGTAGCTGC ACGAGAGAAG TTTATCTATG AAGCTGAAGC TCGAGAAATA AACCAGGTGG GTCACATGGG GGAGCCACTA ATTTCATCGG TTCCTAATTG TGGAGATGGT TGCGTTTGGA GAGCTGATCT GATTGTGAGC TTTGGAGTTT GGTGCATTCA CCGTGTCCTT GACTTGTCTC TCATGGAGAG TCGGCCTGAG CTCTGGGGAA AGTACACCTA CGTTCTCAAC CGCCTTCAGG GAGTGATTGA TCCGGCATTC TCAAAGCTGC GGACACCGAT GACACCGTGT TTTTGCCTTC AGATTCCAGC GAGCCACCAG AGAGCGAGTC CGCCTTCAGC TAACGGAATG TTACCTCCGG CTGCAAAACC GGCTAAAGGC AAATGCACAA CCGCAGTCAC ACTTCTTGAT CTAATCAAAG ACGTTGAAAT GGCAATCTCT TGTAGAAAAG GCCGAACCGG TACAGCTGCA GGAGACGTGG CTTTCCCAAA GGGGAAAGAG AATTTGGCTT CGGTTTTGAA GCGGTATAAA CGTCGGTTAT CGAATAAACC GGTAAGTATG AATCAGGATG GACCCGGTTC AAGAAAGAAC GTGACTGCGT ACGGATCATT GGGTTGAAGA AGAAAATCTC ATGATCAAGG AGACGTCGAG AGGGAAGCCG AAGAATCAAA ACTCTTGCTT TTGATTGCTC CTCTGCTTCG TTAATTGTGT ATTAAGAAAA GAAGAAAAAA AAAGGATTTT TGTTGCTTCA GAATTTTTCG CTCTTTTTTT TTTAATTTGG TTGTAATGTT ATGTTTATAT ACATATATCA TCATCATAGG ACCATAGGCT ACAAACCGAA TCCGGTTTGT GTAATTTTAA TGCGGAATCA TAAAGAAATC GTCGGTTTGA ATTGTT |
| Length | 4706 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 885830.. 892694 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03280.1 |
| Description | NRAMP metal ion transporter family protein |
| TAIR curator summary | Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence. |
| Alias | [ATEIN2][CKR1][EIN2][ERA3][ORE2][ORE3][PIR2][CYTOKININ RESISTANT 1][ETHYLENE INSENSITIVE 2][ENHANCED RESPONSE TO ABA3][ORESARA 2][ORESARA 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg477894 | long-chain acyl-CoA synthetase 6 |
| 2.44949 |
Ahg474651 | ubiquitin-protein ligase 1 |
| 2.82843 |
Ahg487868 | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related |
| 3.87298 |
Ahg495190 | Protein of unknown function (DUF3414) |
| 4 |
Ahg891409 | oxoprolinase 1 |
| 4.69042 |
Ahg494279 | RNA helicase, putative |
| 5.47723 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 6 |
Ahg490606 | |
| 8.30662 |
Ahg945493 | pumilio 6 |
| 9 |
Ahg946922 | acylaminoacyl-peptidase-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|