| Annotation |
|---|
| Description | jgi|Araly1|476894|fgenesh2_kg.2__2024__AT1G77300.1 |
| Sequence |
ATGGATTGCA AGGAAAACGG TATTAGTGAC GCTTCTGGGT GCGATATTGA TGCTAACTCT CTGGCCTCAA ATCTTGCGAT GGACATCAAT GAAGATTTCT ATGAGAAGTT GAGTTCTTGT GGGCACAATA TAGATTCAGT CAGTAGTTTG GAGACTCCTC AGGTTGCTTC AGTTGGAAAA CATATGATAG AAGGCCAAGG GAAGTGTTTT ATAGAGATTG AGCAGATGGG AGACGGGAAC AGTAATAGTG AAGAAGATGC TGGAAACACT GATGATGGTC TCTATGTTTG TTACAACGCT GATGACACTC GGAAGCAGGG AGTGGTTTCA GGTGAGCTTG AACGAACTCA CGGAGTAATT TGTGATGCTG ATTTACTGGT AAATTGCAAC AAGCTGGATG ATGGAAAGGA AAGTCAGGAC ACAAATCTGT CCCTTGTATC CATCGTTTCT GGGAGTATGC AAGAGAAAGG AGCTCCTCAG GCTAAAGAAG ATGAAGGTTG TGGTGGCACA ACATTGCCTA TAGGGGGCAA TGGAATAGAT AATGAATCAA CTTTTGTGAA TGATGCACCA GAACAATTCG AGTCTTTGGA AACCACAAAG CAGAGAAAAC CTGATGAAGT TGATAGTGGT GGTATTAGTT ATACGTTTGA TGATGGAGGT AAGGAAGGGA AAAATGAACC ATCGAGTGAT CAAGATAATG GTTCTTCTGA TGATATATCT CTCATTCAGA GTTTTTCGTT TCCAGATTCG CTATTGGACT CTAGTGTATT TGGCTGTAGC GCCACAGAAA ATTATCTGGA GGATGCAAGT GATATTGAAG GCAATGTGCC TATTGTGGTA TCCCCTTCAT TAGCTATCAC AGAAATGTTA AATAATCATG ACGGTGGCCT ATGTTCATAT GATCTTAACG ATATCACAGT CACAGAGACA ATCAATCCAG AGTTGAAGTT GGTACATGAG GATGAGCTTG ACACTGATCT TTCCGAGAAG AATGAAAAGA TGCTGAAAAA CCATGTTGGG GATTCATCAA GTGAAAGTGC CGTGGCCGCT TTAAGTATGA ATAATGGTAT GGCTGCTGAT CTGAGAGCTG AAAATTTCAG TCAGATTTCA CCCATAGACG ACAAATCTTT TTGTATGGAA GCCAATTCCC CTATTACTGA CTCTTCTTTG ATATGGAATT TTCCATTGAA CTTTGGAAAT GGAGGCATCG AAGTCTGTAA TCCTGACAAT GCAGTTGAGC CACTCAGAAT AATAGACGAC AATGGCAGAA TAGGTGGTGA AGTTGCTTCT GCATCAGGGA CTAATTTTTG TGAAACTGGC TTGTCTTCTT CCCGAAGGAA GACCCGAGAT GGTAAACAAT GTAAAGTGGC GCAGACAAAA ATGAGTGCTC GCCATCCAAG AAAATCCACT AGAAAGAAAC AATCAGAAAG AAACCTTGAA TCTATTTTCA AGTGTTCAAA GCAGAAAAGG AGCTCTCTTT TAAAAACAAG CCGTTCATTT GAGTGGGGAT TACCAAGCAA GACCACTGAA ATCTTCTTAC AGAGCAAAAA TATTCCCTAT GATGGACCTC CGCATCATGA ACCACAGAGA CCTCAGGGCA ATCTTAATAA TGGACAGCAT AATAGAAGTT CTCATAACGG ATATGTTGAA GGATCTAACA GAAACATCCA AGCATCAAGT GGCTCTTGCC TTCGTTTGAA AGTTAAATTT GGTAAATCAG GTGGCCAAAA TCCTTTGAAC ATTACAGTCT CTAAGGTCAG TGGTAACTCT TTGCCTGCTA ATGGTATTGT TAAAGCAGGA ACATGTTTAG AATTGCTAGG ATCAGCAAAT TTTGCTGAGG ATAAACCGCA AACTGTGGAA ACAAGAGAGG ACTTGGTAGA GAAAAGCAAC CCTGTGGAGA TAGTTTCATA TCTGCAGTCA TCTGATTCTA TGAGGGATAA GAAAAATAAT CAAGACGCTG CGGGTTTATG TAGGAAGCTG GGTGGTGATG TTTTAGATGA TGACCCACAT CTTTCCTCTA TTATAATGGT TGAAGAGTGC GAGAGGGCCA CTGGAACACG GTCCCTGGAC GCTGAAACTT CACCAGATTC TGAAGTTATC AACTCTGTGC CTGAATCCAT TACCAATATT GAACATAAAG AGGGTTTGCA TCATGGTTTT TTCACCACTC CAGAAGATGT GGTCAAGAAG AACAGAGTAG TAGAAAAAGA AGATGAATTG CTGGCTTCAA AATCTCCTTT GGAAAATGGT TCACATCTAA TTCCCAGTGC AAAAAAAGGT AAACATTCCA AGTCTAAAAG TAATGGAACA AAGAAAGGGA AATCCAAGAT TTCCGAATCT GCCAAAGACG GGAGAAAAAA TGAATCACAT GAGGGGGTAG AGCAACGCAA ATCCCTGAAT ACCAGTATTG GAAGGGATGA TAGTGATTAT CTTGAAGTAG GGAGAATAGA GTCTCACAAA ACAACAGGTG CCCTTCTAGA TACTGATATT GGGAAAATCA GTGCCACTTA TGGTACCATA TCATCAGATG TGACCAATGT GGAAACGGTT GTGGATGTTA CTATTGAAGA TAGCTATTCC ACAGAGAGTG CCTGGGTTCG ATGTGATGAT TGCTTTCAAT GGCGACGAAT ACCTGCTTCT GTTGTAGGAT CAATTGACGA GAGCTCCAGA TGGATCTGTT TGAACAACTC AGATAAAAAA TTTGCGGATT GCTCAAAATC TCAAGAGATG TCAAATGAAG AAATTAATGA AGAGTTGGGA ATAGGACAGG ATGAAGCAGA TGCATATGAT TGTGATGCGG CTAAAAGAGG GAAAGAAAAG GAACAAAAGA GCAAGCGTTT GACAGGTAAG CAAAAGGCGT GCTTCAAGGC TATAAAAACA AACCAGTTTC TTCATCGCAA TCGTAAATCT CAAACAATTG ATGAGATAAT GGTTTGTCAC TGCAAACCAC CACCTGATGG TAGGTTGGGT TGTGGAGAAG AATGCCTCAA TAGAATGCTT AACATTGAAT GTCTTCAAGG TACCTGCCCA GCTGGCGATT TGTGCTCAAA TCAGCAGTTT CAAAAACGGA AGTATGTTAA GTTTGAGAGA TTCCAATCCG GTAAGAAGGG TTATGGCCTG AGATTGCTCG AGGATGTACG AGAGGGGCAA TTCCTTATTG AATATGTTGG AGAGGTGCTT GATATGCAAT CCTATGATAC TCGCCAAAAA GAATATGCTT GCAAGGGTCA GAAACATTTC TATTTCATGA CACTAAATGG GAATGAGGTA ATAGATGCTG GTGCAAAGGG AAACCTAGGG CGTTTCATTA ACCATAGCTG TGAACCAAAC TGCCGTACTG AAAAGTGGAT GGTGAATGGT GAAATTTGCG TTGGAATATT CTCCATGAAA GACCTTAAGA AGGGTCAAGA GTTGACATTT GACTACAACT ATGTGAGGGT TTTTGGTGCT GCCGCCAAAA AGTGCTATTG TGGGTCATCG CATTGCAGAG GGTATATTGG GGGAGATCCT CTGAATGGTG ATGTAATTAT TCAAAGTGAT TCAGATGAAG AGTATCCTGA ACTTGTGATC CTTGATGATG ATGAAAGTGG AGAAGGAATC TTAGATGCAA CATCTAGGAC CTTCATTGAT GACGCTGACG AGCAAATGCC ACAGAACTCT GAAACGGTTA ATGGTTCCAA GGACCTTGCT CCTGATAATG CCCAATCACA GAGCTCAGTA TCTGTAAAAC TTCCTGAGAG AGTAATTCCT CCACCTCTTC TTCAGCCAAC TGAAGTTTTG AAGGAACTTC CGTCAGGCAT AGCTGTTAGT GCTGTCCAGC AAGAGGTTCC CGTTGAAAAG AAGACTAAAA ACACATCTCC CACGTCCAGT TCTCTTAGCA GACTGTCCTC GGGTGGTGCA AATACTGATA TGACGACAAA GCATGGATCG GGAGAAGATA AAAAGATACT TCCACGGCCT CGTCCTCGTC CTCGTTTGAA AACTTCTCGC TCATCTGTTT CTAGTAAGCG AGACAAAGGA GGTATTTTAT CTGGTGTTAA CAAAGCACAG ATTATACCAG TCAATAAGTT ACAACAGCAA CCTATCAAAT CTAAAAGATC AGAGGAAGTT TCTTCCAGCG GGTGTATTGA AACATTTGAA GGGAAACTGA ACGAGTTACT AGATGCCGTA GGAGGGATAA GCAAGCGGAG GGATTCAGCA AAAGGCTACT TGAAACTTCT GCTGCTCACT GCCGCTTCCC GAGGCACAGA AGGAGGAACC TATTGCAGCA ATCGAGATCT TTCAATGATT CTTGATGCCC TTTTGAAGAC AAAGTCAAAA TCTGTTTTAG TTGACGTAAT CAACAAGAAT GGTATTAGAG TATCTTGCCA CAAGGGAAAT CCTTGCACTG GAGCATATAA TCAGAAGACC TCCTTGCGTA GGGATGGAAA GGTTCATCGA ATTGCACGGA GCTTCCGAGA CAGATGGATA CCTAAACATT TTAGAAAACC TTGGCGCATC GACAGGGAGG AGAGATCGGA GTCTATGAGG TCACCTATAA ACAGCAGGTT CAGAGCTTCA CAAGAACCTC GATATGAACA TCGGTCCCCA AGACCTGCAG AACCAGCTGC GTCTGTCACA CCATCAATGG CTGCAACTCC TGAAACAGCA TCTGTATCTG AGGGATATTC AGAACCTAAT TCCAGTCTTC CTGAGACAAA TGGACGCAAG CGCAAAAGCA GATGGGACCA GCCGTCTAAG ACAAAAGAAC AAAGAACCAT GACTATCTCG TCTCAACAAA GAGATGAAAC TAATGGTAAT CAGGATGTCC AAGATGACCT TCCACCCGGG TTTTCATCAC CCTGCACAGA TGTGCCTGAT GCGATTACTG CACAGCCGCA ACAAAAGTTC CTTTCTCGCT TACCAGTATC CTATGGGATC CCACTTAGCA TTGTTCATCA ATTTGGTTCA CCCGGCAAAG AGGACCCGAC CACCTGGTCC GTTGCTCCTG GGATACCGTT CTATCCATTT CCACCTCTAC CGCCAGTGTC TCATGGTGAG TTTTTCGCTA AGAGAAATGT AATAGCCTGT TCCTCCTCCA TTCGAAACCC GACTTACTCC AATGAGATCT TACCGGCTAC ACCTGTGACT GACTCAACTG CTCCAAACCG GAAGAGAGAG AGTTCATTTG ATATAGGAAC AACTTACTTT CGGCAACAGA AACAGAACGT TCCTCCATGG TTGCGGAACA ACGGGTGGGA GAAAACAGTA AACAGCTCTA TACCTGGGAA TCTAACTTTA GAGAAGAAGC TCAACAGTTA AGTATTCATA ATTTTAGAGA AGTACAGTCG ATGAAGTTGA AATGGAGACA GTGCAGGTCT TAAAGGAGAA TTACAGTGAT TGATTGGTTT ATTTGGCTCA TAGGAAAATC AATCCCCTTT AGGGGAGTCA TGTGCGTTTC GTTTCTTTCC CTTTCCTTTC TTTAGTATAT TCTAAATTCT TTTATAATTA AAAGTCACAT TTCAATGTAA AAGAAATCAC ATTCTTTAAT CTTT |
| Length | 5534 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 16571991.. 16581083 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G77300.1 |
| Description | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) |
| TAIR curator summary | Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development. |
| Alias | [ASHH2][CCR1][EFS][LAZ2][SDG8][ASH1 HOMOLOG 2][CAROTENOID CHLOROPLAST REGULATORY1][EARLY FLOWERING IN SHORT DAYS][LAZARUS 2][SET DOMAIN GROUP 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.69042 |
Ahg479516 | flower-specific, phytochrome-associated protein phosphatase 3 |
| 9.74679 |
Ahg483418 | ENTH/VHS family protein |
| 11.225 |
Ahg495293 | membrane steroid binding protein 1 |
| 16.9706 |
Ahg315930 | Protein kinase superfamily protein |
| 17.5499 |
Ahg943492 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 21.5639 |
Ahg482295 | hydroxyproline-rich glycoprotein family protein |
| 21.8174 |
Ahg495124 | SUMO-activating enzyme 1B |
| 27.7849 |
Ahg477381 | SIN3-like 1 |
| 28.9828 |
Ahg946668 | importin alpha isoform 2 |
| 28.9828 |
Ahg350338 | SPOC domain / Transcription elongation factor S-II protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|