Detail



ID : Ahg316416

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316416|fgenesh1_pm.C_scaffold_2001449
Sequence
ATGTCAGAGG AAGAGCCTTG TGTTACAAGC AAGACTGGGC CGCTGGTCTT CGTTCTGGTT TCGGCACCGA CAACATATGT TTTCTTCGCC TCTGCGCTTC CTGTTATCGC CTTTGGCGAG CAACTCAGCC ACGACACAGA GATCGTTGAG CACAGTGGAA ACGCTAACGT CAACAGCGAA CCACTGCTGA TACTTGGAGT TGCAGAACCA ACTGTCTTAA TGTACAAATA CTTGTTCGAC TTCGCTAAAG GAAAACCAGA ATTGCGAAAA CAGCTCTACT TAGCTAGGGT TGCTTGGGTT TGTGTGTGGA CGGCTTTGTT ACTGTTCCTA ATGGCGATAT TCCACGTGGC TTATATCATC AACCGGTTCA CGAGGATCGC TGGTGAGCTG TTTGGTATGT TGATCTCTGT TCTGTTTCTC CAACAAACCA TAAAGAATAT GTTGAGCGAA TTTAGGATTC CAAAAGGTGA AGACTCAAAA CTTGAAAAGT ATCAGTTTGA GTGGCTCTAC ACAAACGGAC TTCTCGGCCT TATTTTCACC GTCGGTCTTG TCTACACCGC TTTGAAGAGC AGAAAAGCAA GGTCTTGGCG ATACGGAACA GGATGGTGCC GAAGCTTCCT TGCAGACTAC GGAGTTCCAT CAAAACTACC CTCTGGTGTC CCGAGAAGAC TCGTTAGTCC TCTTCCATGG GACTCTGTTT CTTTAAAACA TTGGACTGTC ATCAAGTCTC TCCGGGATAC ATATTTGCGG GCGTTTATAC CCGCATTGAT GATCGCAGGT CTCTACTTCT TTGACCACAG CGTTGTCTCG CAGCTCGCGC AGCAGGAGGA GTTCAACCTC AAGAACCCTT CTGCTTATCA CTACGACATT CTCTTGTTAG GTTTCATGGT GTTGATCTGT GGATTGCTCG GTCTGCCGCC TTCCAACGGA GTCCTCCCGC AGTCTCCTAT GCATACCAAA AGCCTTGCTG TTTTCAAACG ACAGAAGATG GTAATGACAG CCAAAGAAAG CATCAGACAG AGAGCAACGT CTTCCCAAGT GTACGAGGAT ATGCAACAAG TCTTCATCGA AATGGACAAA AGCCCACTTG CTGAGACACA CACAACACTG ATAAATGAGC TGCAAGATCT GAAAGAGGCA GTGATGAAGA AGAGCGAAAA CGATGGATAT ACCGGAGACG AGAGTGGTTT CGATCCAGAG AAGCATGTTG ACGCTTACTT GCCTGTTCGA GTCAACGAGC AGAGAGTAAG CAACCTGTTG CAATCACTGC TAGTGATAGG TGCAGTGTTT GCTATACCGG CCATTAAGCT CATACCTACC TCACTTCTAT GGGGATATTT CGCTTACATG GCTATCGACA GTCTCCCAGA CAACCAATTC TTCGAACGCA CAGTACTTCT CTTCGTCCCA CCAAGCCGGA GATTTAAGGT CTTGGAGGGA GCGCATGCAT CGTTCCTGGA AAAAGTTCCA TATAAGTCAG TGGCTGCATT CACATTGTTT CAGATACTCT ACTTTGGGCT TTGTTACGGA GTGACGTGGA TTCCAGTGGC CGAAATCATG TTTCCGGTTC TTTTCTTCCT CCTAATAGCC ATCAGGCAGT ACCTTCTTCC TAAGCTGTTT AAACAAGCCC ATCTCCGGGA ACTCGATGCC GCGGAGTACG AGGAGATCCC TGGAACTCCT AGAAACCCGC TTGAACTGTC TTTCAGGTCG ACTAACTCGG CACGAGGCGT CCAAGAGTGT GATGCGGGGA TTCTAGACGA GTTAACAACG AGCAGAGGCG AGCTTAAAGT CCGTACGCTC GGTCATAACG AAGACAAAGG CCACCAGATA TACCCCAAGG AGATAGTAGA AGTAGGGGAT GTGGACATGA GTACTTCCAG AGAGTGA 
Length1887
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15488023.. 15491047
Download Sequence
A.thaliana
AGI-codeAT1G74810.1
DescriptionHCO3- transporter family
TAIR curator summary
Alias[BOR5]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
5.19615 Ahg470978 plant glycogenin-like starch initiation protein 5
8.48528 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
10.1489 Ahg471683 Polyketide cyclase/dehydrase and lipid transport superfamily protein
11.9164 Ahg494865 Pectin lyase-like superfamily protein
12.9615 Ahg481782 RmlC-like cupins superfamily protein
14.4222 Ahg489695 Protein kinase superfamily protein
16.3707 Ahg337131 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
17.0294 Ahg892041 cation/H+ exchanger 26
17.2047 Ahg916557
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression