Detail



ID : Ahg470978

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470978|fgenesh2_kg.1__932__AT1G08990.1
Sequence
ATGGGGGCAA AAAACAATAA TTCGAGCAGG AGAATTTTTA TGTTTTATCT TATACTAATA ACATTGTCGT TTTTGGGTTT GGTCCTAAAC TTTAAACCTC TGTTTCTGCT CAATCCCATG ATCAAATCTC CTTCGATAGT AGAGATTCGT TATTCTTTGC CGGAACCGGT TAACCGGCAC CCGATATGGC TCCGACTCAT CAGAAACTAT CTTCCGGATG AGAAAAAGAT CCGGGTGGGT CTTCTCAACA TCGCAGTGAA CGAGCGAGAG AGCTACGAGG CAAGCGGGAC GTCGATCTTG AAGAATGTCC ACGTGTCGCT CGATCCTCTT CCGAACAATC TGACGTGGGA GAGATTATTC CCGGTTTGGA TCGACGAGGA TCACACGTGG CACACTCCTA GTTGTCCAGA AGTCCCTCTC CCTAAGATGG AAGGAATCGA TGCTGACGTA GACGTGGTCG TTGTCAAAGT TCCATGCGAT GGTTTCTCGG AGAAGAGAGG GTTAAGAGAC GTTTTCAGGC TACAGGTGAA TCTGGCGGCA GCGAATCTTG CGGTGGAGAG TGGTTGGAGG AATGTTGATC GGATGGTGTA CGTTGTCTTC ATCGGATCAT GTGGGCCTAT GCATGAGATC TTTAGGTGTG ACGAGCGCGT GAAGCGCGTG GGGGACTATT GGGTGTATCG GCCTGATCTT ACCAGGTTGA AGCAGAAGCT TCTCATGCCT CCTGGTTCAT GTCGGATTGC TCCGCCAGGT CAAGAAGAAG CATGGATACA AGACAAGAAC AAAAGTCTCA CATCCACAAA AACTACATTA TCATCAATTA CTGCCCAACG TGTCGCTTAC GTGACGTTAC TACACTCATC GGAGGTCTAC GTATGCGGGG CAATAGCCTT AGCACAAAGC ATAAGGCAAT CTGGATCAAC CAAGGACATG GTACTCCTCC ACGATGACTC CATAACAAAC AGTTCTCTCA TTGGCCTAAG CCTTGCCGGC TGGAAACTAC GGCGAGTAGA GAGAATCCGT AGCCCTTTCT CCAAGAAACG TTCTTACAAT GAGTGGAACT ACAGTAAGTT ACGTGTGTGG CAAGTGACAG ATTACGATAA GCTAGTGTTC ATAGACGCAG ACTTCATCAT CGTCAAGAAT ATTGATTACC TTTTCTTCTA TCCTCAACTT TCTGCCGCTG GCAATAACAA AGTCATGTTC AACTCCGGAG TCATGGTTCT GGAGCCATCA GCTTGCTTGT TCGAGGATTT GATGCTCAAA TCATTCAAGA TTGGGTCTTA CAACGGGGGA GACCAAGGAT TTCTGAACGA ATATTTCGTG TGGTGGCATA GGTTATCAAA ACGTTTAAAT ACGATGAAAT ACTTCGGCGA TGAAAGCAGG CATGATAAAG CACGCAATCT TCCAGAAAAT TTAGAGGGCA TCCACTACTT GGGACTAAAA CCATGGCGAT GTTACAGAGA CTACGATTGT AACTGGGACT TGAAAACGCG ACGTGTGTAT GCAAGCGAGT CGGTGCATGA GAGATGGTGG AAAGTGTACG ACAAGATGCC CAAGAAGTTG AAAGGTTATT GTGGTTTGAC TCTTAAGATG GAGAAGAACG TTGAGAAGTG GAGGAGAATG GCTAAGCTCG GTGGTTTTCC TGAAAACCAT TGGAAAATTA GAGTAAGAGA TCCTAGGAAG AAGAACCGTC TGAGTCAATG AGAAGAGTAA TCATAAAGTT GCTTATTCAA CAAGAGACTT TTTTTTTTGT TCTTTTGACG TAGAGAGAGA CACAGATTTT GAAGGGGAAT TTCTATCAGG CAATTGTGGA TTAAGAAGGA AAAA 
Length1824
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3245844.. 3248096
Download Sequence
A.thaliana
AGI-codeAT1G08990.1
Descriptionplant glycogenin-like starch initiation protein 5
TAIR curator summary
Alias[GUX5][PGSIP5][Glucuronic Acid Substitution of Xylan 5][plant glycogenin-like starch initiation protein 5]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg493233
2 Ahg318745 Major facilitator superfamily protein
3.4641 Ahg473001
5 Ahg494865 Pectin lyase-like superfamily protein
5.19615 Ahg316416 HCO3- transporter family
9.8995 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
12.6491 Ahg358371 Pectin lyase-like superfamily protein
12.7279 Ahg486975 laccase 8
16 Ahg358814 Acyl-CoA N-acyltransferases (NAT) superfamily protein
17.2337 Ahg316907
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression