| Annotation |
|---|
| Description | jgi|Araly1|316570|fgenesh1_pm.C_scaffold_2001603 |
| Sequence |
ATGAAGAAAA AGCAAGCTGG TCCCCAACAG ACATGCGGGT TCGTCTCCTA TAAAACTTGT TTAATCTCTC CTTCACACTT ATCACGCCAC CTCACCTCCT CCTCTCTCCT CTCTCTCCCT CTGGAGAGAT TATTCCCTCC AATGGATCTC CGACGGAGGC CTCCTAAGCC ACCGGTTAAC AACACCTCCG ACGGATCTTT CCGTTCTTAT CAAACCCGCA CTTCCGATGA CGATCACCGT CGCCGGACTA CAACGATTGC TCCTCCACCT AAAGCATCCG ATGCGCTTCC TCTTCCATTA TATCTGACGA ACGCCGTCTT CTTCACGCTC TTCTTCTCCG TCGCGTATTA TCTCCTCCAC CGGTGGCGTG ACAAGATCCG TTACAATACG CCTCTTCACG TCGTCACTAT CACAGAACTC GGCGCCATTA TTGCTCTAAT CGCTTCGTTT ATCTATCTCC TAGGTTTTTT TGGTATTGAC TTTGTTCAGT CATTTATCTC ACGCGCCTCC GGTGATGCTT GGGATCTCGC GGATACGATC GATGAAGACG ACCACCGCCT CGTCACGTGC TCTCCACCGA CTCCGATCGT TTCCGTTGCT AAGTTACCAA ATCCGGAGCC TATTGTTACC GAATCGCTTC CTGAGGAAGA CGAGGAGATT GTGAAATCCG TTATCGGCGG AGTGATCCCA TCGTACTCGC TCGAATCTCG TCTCGGTGAT TGCAAAAGAG CGGCGTCGAT TCGGCGGGAG GCGTTGCAGA GAGTCACCGG GAGATCGATG GAAGGATTAC CGTTGGATGG ATTTGATTAT GAATCGATTT TGGGGCAATG CTGTGAGATG CCTGTCGGAT ATATTCAGAT TCCTGTGGGG ATTGCTGGAC CATTGTTGCT TGATGGTTAT GAGTACTCTG TTCCTATGGC TACAACCGAA GGTTGTTTGG TTGCTAGCAC TAACAGAGGC TGCAAAGCCA TGTATATCTC CGGTGGAGCC ACCAGTACGG TTCTTAAGGA CGGTATGACC CGAGCACCTG TCGTTCGGTT CGCTTCGGCG AGACGAGCTT CCGAGCTTAA GTTTTTCTTG GAGAATCCAG AGAACTTTGA TACTTTGACA GTAGTCTTCA ACAGGTCGAG TAGATTCGCA AGATTGCAAA GTGTGAAATG CACAATCGCG GGGAAGAATG CTTATGTAAG GTTCTGTTGT AGTACTGGTG ATGCTATGGG GATGAATATG GTATCTAAAG GTGTGCAGAA TGTTCTCGAA TATCTTACCG ATGATTTTCC CGACATGGAT GTGATTGGAA TCTCTGGTAA TTTTTGTTCG GACAAGAAAC CTGCTGCTGT GAACTGGATT GAGGGACGTG GCAAATCAGT TGTTTGTGAG GCTGTAATCA AAGGAGAGAT CGTGAACAAG GTCTTAAAAA CGAGCGTGGC TGCTTTGGTC GAGCTCAATA TGCTCAAGAA TCTTGCGGGC TCTGCTGTTG CAGGCTCTCT AGGTGGGTTC AACGCTCATG CCAGTAACAT AGTCTCTGCT GTGTTCATAG CTACTGGCCA AGATCCAGCT CAAAACGTGG AGAGCTCTCA ATGCATCACC ATGATGGAAG CTATTAACGA CGGCAAAGAT ATCCATATCT CAGTCACTAT GCCATCTATC GAGGTGGGGA CAGTGGGAGG AGGAACACAG CTTGCATCTC AATCAGCGTG TTTAAACCTG CTGGGAGTGA AAGGAGCGAG CAAAGAGTCG CCGGGAATGA ACTCAAGGAG GCTAGCGACG ATAGTGGCCG GAGCAGTTTT AGCGGGAGAG TTATCTCTAA TGTCAGCAAT TGCAGCTGGA CAGCTTGTGA GAAGTCACAT GAAATACAAC AGATCCAGCC GAGACATCTC TGGAGCAACG ACAACAACAA CAACATGA |
| Length | 1908 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 16197086.. 16199482 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G76490.1 |
| Description | hydroxy methylglutaryl CoA reductase 1 |
| TAIR curator summary | Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine |
| Alias | [AtHMGR1][HMG1][HMGR1][MAD3][hydroxy methylglutaryl CoA reductase 1][3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE 1][miRNA action deficient 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg497146 | Endomembrane protein 70 protein family |
| 4 |
Ahg476647 | Brassinosteroid signalling positive regulator (BZR1) family protein |
| 5.47723 |
Ahg470505 | Calcium-binding tetratricopeptide family protein |
| 9 |
Ahg939389 | F-box/RNI-like superfamily protein |
| 15.3297 |
Ahg940649 | |
| 19.2614 |
Ahg484006 | Tudor/PWWP/MBT domain-containing protein |
| 25.6905 |
Ahg471148 | glutathione S-transferase TAU 18 |
| 28.8444 |
Ahg480236 | SH3 domain-containing protein |
| 29.8831 |
Ahg335233 | Plant protein of unknown function (DUF869) |
| 32.3265 |
Ahg328081 | BEL1-like homeodomain 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|