| Annotation |
|---|
| Description | jgi|Araly1|940649|scaffold_601193.1 |
| Sequence |
TGTGATGACT CTTGATACTA GTGGATGGCT CGATTTCAAT TTTGCTGCGT CTTCATCGTG GTCGCTCTTG CGGTTTTGGC CGTAAACCCT AGTTCAAGCT ATCGATTTAC CATTGTGGAA CCGAATTCGG GTTTTGATTC GGATTTGGAC TCAGATTCAG AGTCGTTACT TTTCCATCAG GATTACTCTC CGCCTGCTCC GCCACCGCCA CCACCGCATG GACCGTCGGT ATCTTGTAGC GAGGATCTCG GTGGCGTTGG GTTTTTGGAT ACTACTTGTA AGATTGTCGC CGATTTGAAT CTTACGCATG ATGTGTATAT AGCTGGGAAG GGGAATTTTA TCATCCTGCC TGGTGTTAGG TTTCACTGCC CGATCCCTGG TTGCTCTATA GCTATCAATG TTTCTGGAAA CTTCTCTTTG GGAGCGGAAT CTACAATTGT CGCTGGGACA TTGGAGCTTT CAGCTGGTAA TGCTAGTTTT GCCAATGGGT CGGCGGTGAA CACGACGGGA TTAGCTGGGA ATCCTCCGCC ACAGACCAGT GGGACACCGC AGGGGATTGA TGGTGCTGGT GGTGGACATG GTGGTAGAGG CGCTTGCTGT TTGACTGACA CTAGGAAGCT TCCTGAAGAT GTGTGGGGAG GTGATGCATA CTCGTGGTCG ACTCTGCAGA GGCCGTGGAG CTATGGTAGT AAAGGAGGGT CAACGAGTAG AGAGATTGAT TATGGAGGAG GAGGAGGTGG CAAAGTGAAA ATGGATATTC TGCAGCTTCT GGATGTTAAT GGAAGCCTTT TGGCAAACGG AGGTAATGGA GGAGCCAAAG GTGGTGGTGG CGCTGGTGGC AGCATCTACA TCAAAGCATA CAAGATGACT GGAATTGGAA AGATCAGTGC ATGTGGTGGG AGTGGTTATG GTGGTGGGGG TGGTGGAAGA GTATCTGTCG ATATTTTTAG TAGGCATGAT GACCCGAAGA TTTTTGTGCA TGGCGGATAC AGTATCGGAT GTCCAGACAA CTCAGGTGCT GCTGGGACAC TCTATGATGC TGTTCCCCGA AGCCTTTTCG TTAGCAACTA CAATATGACG ACAGACACGT ATACACTTCT CTTAGAATTT CCCTTCCAGC CACTTTGGAC CAATGTTTAT ATTCAGGATA AAGCGCGAGC AACTTGTCCT CTGTTATGGA GTCGTGTCCA GGTTCAAGGA CAAATTAGTT TGTTGTGCGG TGGTGTTTTG AGCTTTGGAT TAGCTCATTT TGGCACATCA GTATTTGAGT TGTTTGCAGA AGAACTCTTA ATGAGTGATT CTACTATCAA GGTTTATGGG GCATTACGCA TGACTGTCAA AATGTTCTTG ATGTGGAATT CAGAATTGCA TATAGATGGA GGAGGAGGAG ATACAACTGT TTCAACTTCC ATGCTTGAGG CTAGCAATTT ATTCGTTCTT AGGGGATCAT CTGTCATTCG GTCAAATGCA AATCTTGGAG TCCATGGACA AGGTTTCTTG AATCTAACTG GACCAGGGGA TTCGATTGAA GCACAACGGC TTGTTTTGTC ACTATTTTAC CGGATTTATG TTGGGCCTGG GTCTCTTTTG CGTGCTCCTC TACTGAATGC GTCCAGAGAT GCTGTTACAC CAAAGCTCTA TTGTGAACGG CAAGATTGCC CTTATGAACT ACTGAATCCT CCAGAGGATT GCAATGTCAA TTCATCTCTG TCCTTTACCC TACAGGATAT TCTCGTCGAA GGTTTCATTA AAGGATCAGT AGTTCATTTC CACCGAGCAA AAACTGTAAC CCTTGAACCC TCTGGAGAGA TTAGTGCCAG TGGAATGGGT TGTAGAGGTG GCGTAGGTGA AGGTAAATTG CTTGGAAATG GCTTTGGCAG TGGTGGTGGA CATGGTGGTA AAGGGGGGCG TGTATGTTAC AATAACAGCT GTGTTGAAGG TGGAATTACA TATGGAAATG CAAATCTCCC TTGTGAGCTT GGCAGTGGAA GTGGCGATTT TAGCCCTGGT TATTCATCTG CTGGTGGTGG TATTGTAGTG ATTGGTTCAA TGGAGCAGCC TCTATCTGGT TTATCACTTG AAGGCTCAAT TAGGGTTGAT GGAGAAAGTG TCAAACGTTT GAGTAGAGAT GAAAATGGTT CTATTGTAGC TCCTGGGGGT GGTTCTGGGG GAACAGTCCT TTTGTTCCTG CGTTATCTTA TTTTAGGAGA GTCGTCCCTT CTCTCAAGTG GTGGTGGGTC TGGCAGTCCT GGTGGTGGTG GTGGTGGCGG AGGTGGGAGG ATTCATTTTC ATTGGTCAAA CATTCCGACT GGGGACATAT ACCAGCCCAT TGCTAGTGTA AAAGGAATAA TTCATGCACG AGGGGGAGCA GCAGCGGATG ATGGTTTTTA TGGCAAAAAT GGTACAATAA CTGGGACGGC TTGTCCGAAG GGACTCCACG GTATATTTTG CAAGGAATGT CCATCTGGTA CATTCAAGAA TGTTACTGGA TCCGACCCTT CTCTTTGTCG CCCTTGTCCC GTTGATGAGC TTCCAACTCG TGCTGTCTAT GTCACAGTTC GAGGTGGCGT TTCTGAGACA CCATGTCCAT ATCGATGCAT ATCGGAAAGG TATCACATGC CACACTGTTA CACCGCACTC GAGGAGTTAA TTTACACATT TGGTGGGCCT TGGTTGTTTG GTCTTCTTCT GATGGGTCTC CTCATCCTCT TAGCACTTGT ACTTAGTGTT GCACGAATGA AATTTGTTGG AGTTGATGAT TTGCCTGGCC CAGCTCCCAC ACAGCATGGC TCTCAAATAG ATCATTCCTT CCCTTTCCTG GAATCACTTA ATGAGGTGTT GGAAACAAAT AGAGCTGAGC AATCTCAGAG TCATGTGCAT AGAATGTATT TTATGGGTCC TAATACATTC AGTGAGCCGT GGCATCTCTC ACACATTCCC CCGGAGGAGA TTAAAGAGAT AGTATATGAG GCTGCATTTA ACACATTTGT CGACGAAATC AACTCTATAG CTGCATATCA ATGGTGGGAA GGTGCCATAT ATAGTATTCT TTCAGTAGTT GCATATCCGC TCGCATGGTC ATGGCAGCAA TGGCGGCGGA AGATGAAGTT GCAAAAACTG CGTGAGTTTG TACGTTCAGA ATATGATCAC TCCTGTTTAC GCTCCTGTCG CTCCCGAGCT TTATACGAGG GTCTGAAGGT CGCTGCAACC TCCGATTTGA TGCTTGCATA TCTGGATTTC TTCCTTGGTG GTGATGAAAA AAGGACAGAC CTTCCACCTC GACTTCACCA AAGGTTACCA ATGCCCATAT TGTTTGGTGG TGATGGCAGT TACATGGCTC CTTTCTCACT TCAAAATGAC AACATTCTTA CCAGTCTGAT GAGTCAGCTT GGTTCGCCTA CTACTTGGTA CAGACTGGTG GCTGGTGTTA ATGCTCAATT ACGTCTTGTT CGCCGTGGGC GTCTGAGATC AACATTTCAT TCTGTTCTGA AATGGTTAGA AACTCATGCT AATCCCGCTC TGGAAACACA TGGCATACGG GTTGATCTGG CCTGGTTCCA GACTACAGCT TGTGGTTACT GCCAATATGG TCTCTTGATT CATACTGTTG AGGATTGTGA ACCAACATCA CCTCAGTGTG TCAATGAAAC AGCATGGACT GAAATCCAGC CACGAAAGAA CTATGGAGGG ATAATCGACC TTGACAGCTT ACCGAGTCTG AAAGAGAAGA GAGATATGTT TTTCCTTCTC TCTTTCTTAG TTCACAACAC AAAACCTGTG GGCCACCAGG ATATGGTTGG CTTAGTTATC TCGATGTTAC TTTTAGGAGA TTTTAGTCTA GTCTTGCTCA CACTGCTCCA GCTGTATTCA ATTTCTTTGC TGGATGTACT TTTGGCTTTG TTCATATTAC CTCTCGGCTT GCTTCTGCCA TTCCCCGCCG GGATTAATGC CTTATTCAGT CATGGACCCA GACGCTCTGC TGGCTTAGCA CGTGTTTACG CATTGTGGAA CTTCATGTCC TTAGTCAATG TGTTTGTTGC TTTTCTCTGC GGATATGTTC ATTATCACAG TGAATCATCA GCTAGCAAGA AAATCCCATT TCAGCCGTGG AATATAAACA TGGGTGAAAG TGAATGGTGG ATATTCCCAG CAGGATTGGT CGTGTGTAAG ATAATGCAAT CGCAGCTCAT AAATCGACAT GTAGCAAACC TGGAGATACA AGACCGCTCG TTGTATAGTA AGGATTATGA GCTGTTTTGG CAGTCGTGAC AAAGTCTTGT CAGGTAATTT TTCTCAGAAC AACTAAAAAC AGTCCCGCCC CAAGT |
| Length | 4325 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4560052.. 4568315 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G11700.2 |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg482837 | AMP deaminase, putative / myoadenylate deaminase, putative |
| 3 |
Ahg495887 | MIF4G domain-containing protein / MA3 domain-containing protein |
| 4.24264 |
Ahg494702 | regulatory particle triple-A ATPase 4A |
| 4.47214 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 6.63325 |
Ahg492356 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain |
| 9 |
Ahg922878 | SEUSS transcriptional co-regulator |
| 11.1355 |
Ahg496493 | histone deacetylase 6 |
| 11.6619 |
Ahg895977 | RNA polymerase II transcription mediators |
| 12.4097 |
Ahg491060 | RNA polymerase II large subunit |
| 12.49 |
Ahg494092 | Cysteinyl-tRNA synthetase, class Ia family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|