Detail



ID : Ahg316920

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316920|fgenesh1_pm.C_scaffold_2001953
Sequence
ATGGATGTTT CTTCCATTGC GCGAACAAGC CTAACTGATC AACATCCTTT GTTAATGGAC CACCATACCC GCAATAACCG CGACCACATC GTTGACATTA CAATGAGCAA CGACCAGGAC TCTTCTTCTA TCGATGAGCT CACTCCTCCT CATCAAGCTG AAGAGGAGAC AGTATCATCA TCAACTGTTA CAGCGCATCC AGCTCCTCCT CAGCAAAGAC CAACTTCTTC TAGGAATGCT CGCCGTACTA CTAGTACTAG GAGTCCACTG AATTCCGGCC TTTGGATCTC AGTTGAGTTA GTTGTCACTG TCGCTCAGAT TGTTGCAGCC ATTGTAGTTA TGGTTCTCGC TAAAGATGAA CATCCCGAAG CGCCATTATT TACTTGGGTT ATTGGTTATA CTTCTGGCTG TATAGCCACT CTCCCTATTC TCTATTGGCG TTTTCGCACT TATAGTCGAG GTGCAGGACA AGATTCTTCA CAACGTCTCA GTAGCTCTTC TCTAGCCAAT AATAACCCTT CAGAGTCCGC ACCATATACA GCCGTCTCAG TTGCTCAAGC AGCAGATGAA GAAAATAGCA CCGACATGAG TGCAGCACCT AGAAACAATC AAGTTGGTGA AACCTTAAGA ACAAGGCTCA ACGGGCTGGT GGACCACTTC AAGATGGCCA TTGATTGTTT CTTTGCGGTG TGGTTTGTTG TGGGGAATGT ATGGATATTT GGAGGTCACT CATCTCCTTC TGATTCTCCT AAACTGTACA GGTTATGCAT AGCGTTCCTA ACTTTCAGTT GCATTGGATA TGCAATGCCA TTCATACTAT GTGCAACCAT ATGTTGTTGT CTGCCTTGCT TAATCTCTGT TCTCGGATTT CGAGAAAACT TCTCACAAAC TAGAGGAGCC ACTACCGAGG CCATCAACGC ACTGCCTGTC TACAGGTTCA AATCAAAAAG TAGAAATGAT TTGGAATTTT CAGAAGAAGG TGAAGGTGGA TTTCTTCTCT TGGGATCTCA GAAGAAACGT CTTATATCAG GCGAGGATGC CAGCTGTTGC ATCTGCTTGA CTAGATATGG AGACGATGAA CAAGTTAGAG AGCTTCCATG CTCGCATGTC TTCCATGTAG ACTGTGTAGA CAAATGGCTA AAAATCAATG CGACTTGCCC TCTCTGTAAA AATGAGGTTG GAGAAAGCAG CGTTGCTTCC TCATAG 
Length1206
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17972766.. 17974310
Download Sequence
A.thaliana
AGI-codeAT1G80400.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg484841 NIMA (never in mitosis, gene A)-related 6
8.7178 Ahg486174
26.9072 Ahg491303 tRNA synthetase class II (D, K and N) family protein
32.619 Ahg486380 Protein kinase superfamily protein
45.4753 Ahg476065 Protein of unknown function (DUF155)
46.3573 Ahg317863 nudix hydrolase homolog 26
47.0532 Ahg343169 endonucleases
48.2183 Ahg890692 heat shock factor binding protein
49.5681 Ahg323570 voltage dependent anion channel 5
52.8678 Ahg481571 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression