| Annotation |
|---|
| Description | jgi|Araly1|323570|fgenesh1_pm.C_scaffold_5001114 |
| Sequence |
ATGAGTAAGG GTCCGGGACT ATTCGCCGAT ATCGGAAAAT CTGCGAAAGA TCTGTTGACG AGAGATTACA GTACCGATCA GAAATTCAGT ATCTCCACTA ACAGTGTCTC CGGCGTCGCT CTTACTTCCA CTGCTCTCAA GAATGGAGTA CTACATGCTG CTAATGTTGC TACACAATAC AAGTACAGAA ATGCTTTGTT CGATGTCAAG ATCGATACTG ATTCCAATAT CTTGACAACC GTCACATTCA CTGAGATCCT TCCATCGACA AAAGCCATTG CTTCCTTCAA AGTGCCTGAT TACAACTCTA GCAAGCTGGA AGTCCAATAC TTCCATGATC ACGCAACAGT TACAGCCGCT GCAGCCTTAC AACAAAACCC TCTAATTGAT GTAACAGCCA CTCTTGGCTC ACCAACTATC TCATTTGGTG CTGAAGCTGG GTATGACACT ACATCTCGAA CTTTCACAAA GTACAACGTC GGAATCAGTG TCACAAAGCC AGATCGATGT GCCTCCATAA TATTGGGAGA TAAAGGAGAT TCGATCAAAG CTTCTTATCT TTATCACCTA GATGAGTCGA AGAGAAGCGC GGCAGTTGGA GAGGTTATCA GGAAAATCTC AACGAACGAG AACACAGTAA CTGTTGGTGG ATTGTATGCT GTTGATCACT TGACGAATGT TAAAGCTAAG CTGAACAGTA ACGGTAAGCT TGGAGCTCTT CTGCAACATG AGGTCCTTCC AAAATCGATA GTGACAATCT CAGGTGAGAT TGATACCAAG ACATTAGACA AGTACCCAAG GTTTGGTCTC TCTCTTGCAC TTAAACCTTG A |
| Length | 831 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14010939.. 14012648 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G49920.1 |
| Description | voltage dependent anion channel 5 |
| TAIR curator summary | Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. |
| Alias | [ATVDAC5][VDAC5][ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 5][voltage dependent anion channel 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.8322 |
Ahg491208 | Protein kinase superfamily protein |
| 18.9737 |
Ahg917551 | myb-like HTH transcriptional regulator family protein |
| 20.5913 |
Ahg330654 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 21.4243 |
Ahg483030 | isoamylase 1 |
| 27.5681 |
Ahg477806 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
| 33.0151 |
Ahg475314 | NAD(P)-linked oxidoreductase superfamily protein |
| 38.1051 |
Ahg496810 | zinc ion binding |
| 44.7437 |
Ahg930748 | |
| 49.5681 |
Ahg316920 | RING/U-box superfamily protein |
| 52.6403 |
Ahg480585 | F-box/RNI-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|