Detail



ID : Ahg318072

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318072|fgenesh1_pm.C_scaffold_3001088
Sequence
ATGTATGACT CTCAAGTTTT GAAATCTAAA TACAATCCAT TTCTCAGACG TTCGCATTCT GGAAAGAAAT TCCAGGGCAC AGTAACCATG TCAGAGGGCA TAGAAACTTG CGAAGAATCT ACTAGTGGCG AATCTTTTCC ATACAGATTT CAACTTGAAG AGGATGTAAA AAGATTGCAA CTGCAACTCC AACAAGAAAT AGATTTGCAT ACATTTCTAG AGAGTGTCAT GGAGAAAGAT CCTTGGGAGC TATCTTATTC TTCTAGTGTT CCACATCCTG CTCAGGAACT TCTTTCCAAT ATAGTTACGC TAGAGACTGC AGTCACAAAG CTCGAGCAAG AAATGATGTC ACTGAATTTC CAACTTAGCC AAGAGAGAAA CGAGAGGAGA CTCGCGGAAT ACCATTTGAC ACATTCGGCT TCTCCACTAA ATTCTTCTTC TTCCCTGAGA TATTTGAATC AGTCAGATTC TGAATTACAT CAATCAGCAG AAGACAGTCC ATGTCAAGAC CAAACAGCCC AAGACCAAGA ATCTTCATCT GAATCATCTC CAGCAGAGTC AACTGTTGAG CAAACACTGG ACCCAAGTAA TGACTTTCTT GAAAAGAGGC TAATGAGAAA GACAATTGCG AGGAAGCTAC CTCGAGGAAT GCCACCAAAG CACCTGTGGG ATCACCCTAA TCTATTGTCT GAAGAAATGG TAAGATGTAT GAAGAATATC TTCATGTCTC TCGCTGATCC AACAGCAACT TCAAAAGCAT CTTCAAACGA GAGCCACCTC TCACCAGTAT CACCTCGCGG GCATCTATCT AGCTCAGCGT CCTGGTGGCC TTCAACAGAA CGGTCAATGA TCTCCTCATG GGTGCAAAGC CCACAAATAG ATATCCAAAA TAACGCCAAT GTTTTGGCCA CGGGAGATGT CTTTGATCCT TATAGAGTTC GTGGGAAGTT AAGCTGGGCG GAGATTGGAA ACTATAGTTT GGCATCCGAG GTTTCTTGGA TGTCTGTTGG GAAGAAACAG CTGGAATATG CTTCCGGGGC GTTGAGGAAG TTCAGGACAC TGGTTGAGCA ATTGGCTAGA GTAAATCCTA TTCATTTGAG CTGCAACGAG AAGCTAGCTT TTTGGATTAA CCTATATAAT GCGTTGATCA TGCATGCTTA TTTGGCTTAT GGCGTCCCAA AAAGCGACCT GAAGCTTTTC TCGTTGATGC AAAAGGCGGC ATATACAGTT GGAGGGCACT CATATACTGC GGCGACAATG GAATATGTGA TACTGAAGAT GAAACCGCCT ATGCACAGGC CACAAATTGC TCTGCTTCTC GCCATCCACA AGTTGAAAGT ATCAGAAGAA CAGCGCAGGG CAAGCATTGA TACACATGAA CCTCTTCTTG GCTTTGCTCT AAGCTGTGGA ATGTACTCAT CCCCTGCGGT GAGGATCTAC ACAGTGAAAG GAGTGAAAGA AGAGCTGCTA GAAGCACAAA GAGACTTCAT ACAAGCATCG GTAGGGCTGA GCAGCAAAGG GAAGCTCTTA GTACCCAAAA TGCTCCATTG TTACGCTAAG AGTTTGGTGG AGGATTCGAA CTTGGGGGTC TGGATATCAA GGTACCTTCC TCCGCATCAA GCGGCTTTTG TGGAGCAATG CATCTCTCAG AGAAGACAAA GCCTTCTCGC TTCAAGGAAC TGTGGAATAC TCCCTTTCGA TTCTCGTTTC AGATACCTGT TTCTGCCCGA CGACAACACC TCGTTGTAA 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4941699.. 4944400
Download Sequence
A.thaliana
AGI-codeAT3G13000.2
DescriptionProtein of unknown function, DUF547
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8997 Ahg901152 plasmodesmata-located protein 3
20.7846 Ahg480193 O-Glycosyl hydrolases family 17 protein
22.3159 Ahg485907 Pectin lyase-like superfamily protein
22.4944 Ahg333544 IQ-domain 18
36.4966 Ahg945946 SKU5 similar 4
39.0512 Ahg488402 longifolia1
39.1408 Ahg491249 Leucine-rich repeat protein kinase family protein
42.9185 Ahg937784 Pectin lyase-like superfamily protein
44.4297 Ahg926848 IQ-domain 31
53.5724 Ahg474334 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression