Detail



ID : Ahg333544

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333544|fgenesh1_pg.C_scaffold_1000109
Sequence
ATGGGGAAAA AGAACGGCTC TTCTTCTTGG CTTACCGTCG TGAAACGAGC TTTCCGATCT CCGACCAAGA AAGATCATAA TAACGACGTC GAAGAAGATG AGGAAAAGAA GAGAGAGAAG AGACGGTGGT TTAGAAAACC GGCGACTCAA GAATCTCCGG TGAAGTCTTC CGGTATCTCT CCGCCGCCAC CACCTCAAGA ATCAGTTAAC GCAAACTCAC AAACTTCTCC GGAGACAGCA CCGAGTTACG CAACGACGAC GCCGTTATCG AACGCCGGAA ACCCTCCGTC CGCCGTCGTC CCCATCGCCA CGTCAGCATC TAAGACACTC GCACCGAGAA GGATTTATTA CGCAAGAGAA AATTACGCTG CTGTTGTTAT CCAGACTTCT TTCAGAGGAT ATTTGGCAAG AAGAGCATTA AGAGCATTAA AAGGGTTAGT GAAGCTACAA GCATTGGTGA GGGGTCATAA TGTGAGAAAA CAAGCCAAAA TGACATTAAG GTGTATGCAA GCTCTGGTTC GAGTCCAGTC TCGTGTGCTT GACCAACGCA AACGCTTGTC TCATGACGGT AGTCGCAAAT CCGCGTTCAG CGACTCTCAC GCTGTTTATG AATCTCGATA TCTTCAAGAG ATATCAGATC GACAATCCAT GTCAAGAGAA GGAAGCAGCG CCGCGGAAGA TTGGGATGAC CGACCACACA CGATAGACGA AGTGAAAGCG ATGCTACAAC GGAGACGGGA CACAGCATTG AGACATGAGA AGACTAATTT GTCTCAAGCT TTCTCTCAAC ATATGTGGAG AACGGTTCGT AACCAATCCG TGGGAGGAGA CCACGAGGTG GAACTTGAGG AGGAAAGACC AAAATGGCTT GACCGGTGGA TGGCTACTAG ACCGTGGGAT AAACGAGCTA GTAGTAGAGC TTCGGTTGAC CAAAGGATTT CAGTTAAAAC CGTTGAAATC GACACTTCTC AGCCTTACTC AAGAACAAGA ACAGGAAGCC CGAGTCGTAG CCAAAGACCT AGTTCCCCAT CAAGAACTAG CCACCATTAC CAATCCCGCA ATAATTTCTC AGCCACTCCA TCTCCGGCTC AGTCTAGACC AATACATATT CGGTCAGCTA GTCCACGGTG CCAGAGAGAC CCGAGGGAAG ACCGGGACCG AGTAGCTTAT AGTTACACAT CAAACACACC AAGCTTGAGA TCTAACTATA GTTTCACAGC TAGGAGTGGA TGTAGCATTA GTACCACAAT GGTTAATAAT GCATCATTGT TGCCTAATTA CATGGCTAGT ACGGAGTCGG CTAAGGCGAG GATCCGGTCT CAGAGCGCAC CGAGGCAACG AGCCTCAACT CCCGAGAGGG ACCGTGCGGG TTTGGTCAAG AAACGGCTCT CGTACCCTGT ACCCCCGCCA GCGGAATATG AGGACAATAA TAGCTTAAGG AGTCCAAGCT TTAAGAGTGT GGCTGGTTCA CATTTTGGTG GAATGTTAGA GCAGCAATCG AATTACTCTT CATGTTGCAC TGAGTCTAAT GGTATTGAGA TCTCTCCAGC TTCTACTAGT GACTTTAGGA ATTGGCTTAG ATGA 
Length1584
Protein Sequence
Protein Residue
Map Locationscaffold_1: 445457.. 447705
Download Sequence
A.thaliana
AGI-codeAT1G01110.2
DescriptionIQ-domain 18
TAIR curator summary
Alias[IQD18][IQ-domain 18]
Gene coexpression
MR
MR Locus Description
1 Ahg489650 Protein of unknown function (DUF640)
9.94987 Ahg485480 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)
22.4944 Ahg318072 Protein of unknown function, DUF547
24.4949 Ahg486512 homeobox-leucine zipper protein 3
24.6982 Ahg942134 Protein of unknown function (DUF630 and DUF632)
27.2213 Ahg472412 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28 Ahg330506 GTP binding;GTP binding
34.6843 Ahg489241 DOMAIN OF UNKNOWN FUNCTION 724 10
35.0714 Ahg949026 ribosomal protein 1
48.621 Ahg489647 Duplicated homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression