Detail



ID : Ahg318665

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318665|fgenesh1_pm.C_scaffold_3001681
Sequence
ATGGTTTCCG ACTTGGACCT CGTGACCCGA CTCCGTGAGA TTCTCGGTAG CTCCGACCTA AACACGGCGA CTCCGGCTAG CGTCCGTCGT CAGCTGGAGG CAGATTTCGG TGTCGACTTG ACAGATAAAA AAGGCTATAT TAGGGATCAA ATCGATACTT TTCTCGAGAG CAATGGCGCT GTAGAAGACA AACCTGAGAG CTCTAAGCCA GAAGAAGACA TTAATGCCGA CGAAATCAAG GCGGAAATTG AAGGAGGCGA TGGAGAAGAC CTCGACGGAG ATGGAAGTGA AAGTGAGGAA GAGAAGGAGG AACGGCCAGT AAAGGCCAAG AAACGAGGTG GTGGCTTTAC CAAAGTATCT CAGTTATCTC CACAACTTGA GAAAGTTGTT GGAGCATCTC AGTTAGGTCG AACCGAGGTT GTGAAGAAAA TGTGGGCCTA TATCCGAGAG AACGATTTGC AAGACCCAAA GGACAGGAGG AAGATAGTGT GTGACGAGTT GCTGCATTCC TTGTTCCGTG TAAAGACCAT TAATATGTTT CAAATGAGCA AGGCATTAAC CAAGCATATT TGGCCCTTAG GTGATGGAGA TGGGTGTGCT AACAATGTGA AAGAAGAAGA TGAAGAGGAG GCATCAGAGG GAACAGATAA GAAAAGGGAG CAAAGCGAAG AAGTGGAAGA GAATAAGGAA GAAGAAAGTG AAGAGGAGGA AGTTAGGAGT TTGCGGAAAC GCAAGAGAAA AAAGCCTGCC AAGTCGGTAG AGAAGCCCAA AAGAAAAGGA GGAGGTGGCT TTGCTAAAGT TTGCAGCCTC TCGCCGGAGC TTCAGGCATT TACTGGGGTG ACAGAATTAG CCAGGACCGA GGTTGTGAAA ATGCTTTGGA AGTACATAAA GGAGAACAAT TTGCAAGATC CGAATGATAA ACGCATAATA ATATGCGACG AATCATTGCG ATCTTTATTC CCTTTCGAGT CCATCAATAT GTTTCAAATG AGTAAACTGC TAACAAAGCA CATATGGCCT TTAGAGGATA ATGCAGGAGA ATCAGTTAGC TCTAACTCTC CAAAGAATGG AAAGCAAAAA ATGGAATCAG ATGGAGATAG TGAGGAACCA AATGAGAAAG ATAAAAAGCA GAAGAAAGAA GTTCTTGCTC CCCTTCCACT TTCAGTTGCT CTTGTCAAGT TCTTGGGTAA TAATGGAGAA AGCTCGCTGT CAAGGGCGGA TGTGGTAAAG AGATTGTGGG AGTACATAAA ACAGAATGAT CTTCAGGATC CTTCTGACAA GAAGAGAATC ATATGTGATG AGAAGCTGAA AGAACTCTTC AAAGTTGATT CATTCGAAGA CACGTCGTTC TCAACACTTC TGACCAACCA CTTCACCAAG GCCGAACAAT GA 
Length1392
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7749024.. 7751672
Download Sequence
A.thaliana
AGI-codeAT3G19080.1
DescriptionSWIB complex BAF60b domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.48683 Ahg496876 Nucleotide-diphospho-sugar transferases superfamily protein
24.779 Ahg919857
26.2679 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
30.9839 Ahg893903 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
36.0555 Ahg474332 tRNAse Z3
49.5076 Ahg934372 Tetratricopeptide repeat (TPR)-like superfamily protein
54.5436 Ahg476028 male gametophyte defective 3
63.3088 Ahg487312 Surfeit locus protein 6
64.5368 Ahg312653 P-loop containing nucleoside triphosphate hydrolases superfamily protein
74.6994 Ahg484092 microtubule-associated proteins 70-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression