Detail



ID : Ahg319024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319024|fgenesh1_pm.C_scaffold_3002040
Sequence
ATGATCGGAC AACTTATGAA CCTCAAGGCG ACGGAGCTCT GTCTTGGTCT CCCCGGCGGC GCTGAAGCCG TTGAGAGCCC TGCCAAATCG GCGGTGGGAA GCAAGAGAGG CTTCTCCGAG ACCGTTGATC TTATGCTCAA TCTTCAATCT AACAAAGAAG GCTCCGTCGA TCTCAACAAC GTCGCTGCAG CTCCTAAGGA GAAGACTACC CTCAAAGATC CTTCTAAGCC TCCTGCTAAA GCACAAGTGG TGGGATGGCC ACCTGTGAGG AACTACAGGA AGAACATGAT GACTCAGCAG AAGACCAGTG GCGAGGAAGA GGCCAGCAGC GAGAAGGCCG GGAGCGGCGG TGGAGGAGCG GTCGGAGCCG GCTTGGTGAA GGTGTCCATG GACGGTGCTC CCTATCTGAG GAAAGTTGAC CTCAAGATGT ACAAAAGCTA CCAGGATCTC TCTGATGCCT TGGCCAAAAT GTTCAGCTCC TTTACTATGG GAAACTATGG AGCACAAGGA ATGATAGATT TCATGAACGA GAGCAAGCTT ATGAATCTCC TGAATAGTTC TGAGTATGTC CCAAGCTACG AGGACAAAGA TGGTGATTGG ATGCTCGTCG GCGATGTCCC ATGGGAAATG TTTGTCGAGT CCTGCAAACG TTTGCGCATT ATGAAGGGAT CTGAAGCAAT TGGACTTGCT CCGAGAGCAA TGGAGAAGTA CTGCAAGAAC AGATCTTGA 
Length729
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9793402.. 9795551
Download Sequence
A.thaliana
AGI-codeAT3G23050.1
Descriptionindole-3-acetic acid 7
TAIR curator summaryTranscription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.
Alias[AXR2][IAA7][AUXIN RESISTANT 2][indole-3-acetic acid 7]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg942118 Protein of unknown function, DUF642
8.66025 Ahg496502 Pectin lyase-like superfamily protein
9.38083 Ahg479094 nitrile specifier protein 4
9.79796 Ahg934869 expansin A8
10.4881 Ahg484671 expansin A5
11.1355 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
11.4891 Ahg476161 beta carbonic anhydrase 4
20.7846 Ahg482953 jacalin-related lectin 23
22.2486 Ahg470596 Chitinase family protein
26.533 Ahg930029 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression