| Annotation |
|---|
| Description | jgi|Araly1|470596|fgenesh2_kg.1__550__AT1G05850.1 |
| Sequence |
GTTTAGTGTT TCTTCTTCCT TGTCTCTCCC GAGAATCTCT TATTTTCTCG GCAACGAAGC AAAAAGGGTA GTTTTTGTCG GTTGAATCAC AAACTAATTT TCTCGATCTC TCTCTGGATC TGTAGCTGAT CTGCATTGCG GCTTGTAGCT GGTATTTGTT CCATAGTTGT AAGATATGGT GACCATCCGG AGTGGTTCGA TCGTGATTCT GGTTCTGCTG GCTGTATCAT TCCTGGCCTT GGTTGCAAAT GGAGAGGACA AAACGATTAA AGTGAAGAAA GTGAGGGGAG AGAGGGTGTG CACACAGGGA TGGGAATGCA GCTGGTGGTC TAAATACTGC TGTAACCAGA CGATATCAGA TTACTTTCAG GTTTATCAGT TTGAGCAACT CTTTTCCAAA AGGAACACTC CCATTGCTCA CGCTGTTGGT TTCTGGGACT ACCAGTCCTT CATTACTGCT GCTGCCCTCT ATGAGCCTCT TGGGTTTGGT ACCACTGGAG GAAAGCTCCA GGGACAGAAA GAAATGGCTG CCTTTCTCGG TCATGTTGCC AGCAAAACGT CCTGTGGCTA TGGAGTCGCA ACAGGAGGGC CTTTAGCTTG GGGTCTGTGC TATAACAGGG AAATGAGCCC AATGCAATCC TACTGTGACG AGTCCTGGAA ATTCAAGTAC CCTTGCAGTC CTGGAGCTGA ATACTACGGA CGTGGGGCCT TACCCATTTA CTGGAACTTC AACTACGGTG CAGCTGGGGA AGCCCTGAAA GCTGATCTCT TGAACCACCC CGAGTACATC GAGCAGAACG CGACACTTGC ATTCCAAGCT GCAATCTGGA GATGGATGAC TCCAATCAAG AGATTTCAGC CCTCAGCCCA CGACATCTTT GTCGGAAACT GGAAACCTAC AAAGAACGAC ACTTTGTCCA AGCGTGGCCC AACTTTCGGC AGCACCATGA ACGTCCTCTA CGGAGAGTAC ACATGTGGCC AAGGTTCCAT TGATCCAATG AACAACATAA TCTCACACTA CTTATACTTC CTCGACCTCT TGGGTATTGG AAGAGAAGAC GCCGGGCCAA ACGAGGAGCT GAGTTGCGCA GAACAGAAAC CTTTCAACCC TTCAACTGTA GCTTCCTCTT CCTCTTCGTA AGTCTTATGA TGTATCGCCA TTGCTCTCAA GTCTCTCTTG CTTCGCCGAA GAAATGTTAC GTAATAAGTG AAATTGCTTG TGGTAAAAAA TTTTGTCCCT CTAGAACTTA TAATGCAAAC AAAATTTATA TTTTTCTGTA TGTAAAACCA TATTTAATTA TTGTATTTGA AGAATGTGTG TAAAATAGAG AAAAGCGAGG AAACATAAAT GTGGTTTGCG AATGATATGT CATAAATTTG TTCACATGGT TTT |
| Length | 1393 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT1G05850.1 |
| Description | Chitinase family protein |
| TAIR curator summary | Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. |
| Alias | [ATCTL1][CTL1][ELP][ELP1][ERH2][HOT2][POM1][CHITINASE-LIKE PROTEIN 1][ECTOPIC DEPOSITION OF LIGNIN IN PITH][ECTOPIC DEPOSITION OF LIGNIN IN PITH 1][ECTOPIC ROOT HAIR 2][SENSITIVE TO HOT TEMPERATURES 2][POM-POM1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg490641 | proline-rich protein 4 |
| 8.42615 |
Ahg893150 | beta-6 tubulin |
| 9.48683 |
Ahg473169 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 11.1803 |
Ahg926953 | glycosyl hydrolase 9B7 |
| 11.3137 |
Ahg922093 | photosystem I subunit K |
| 11.5326 |
Ahg490360 | galacturonosyltransferase 6 |
| 12.2474 |
Ahg494557 | tubulin alpha-2 chain |
| 14.5602 |
Ahg476963 | Pollen Ole e 1 allergen and extensin family protein |
| 15.0997 |
Ahg473640 | photosystem I subunit F |
| 15.2315 |
Ahg491486 | cellulose synthase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|