Detail



ID : Ahg479094

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479094|fgenesh2_kg.3__1795__AT3G16410.1
Sequence
ATTAAACGCA AGCAAAAGAG ATGGCTCAAA AGCTAGAAGC AAAGGGTGGT GAGACAGGAG ATGTATGGGA TGATGGTGCT TACGAAAATG TTAGAAAGGT ATATGTAGGG CAAGGCCAAT ATGGTATAGC CTTCGTCAAG TTTGAGTATG TCAATGGTTC TCAAGTGGTT GTTGGAGATG AACATGGAAA AAAGACAGAG CTAGGAGTTG AGGAGTTTGA GATTGATGCG GATGACTACA TCGTATACGT GGAAGGTTAC CGTGAGAAAG TTAACGATAT GACCTCAGAA ATGATCACGT TTCTTTCTAT CAAGACTTTT AAAGGCAAAA CCTCTCATCC TATCGAAAGA AGACCTGGGG TTAAGTTTGT GCTACACGGT GGAAAAATCG TTGGGTTTCA CGGACGTTCC ACCGTCTACA CTCCCTCGGG GCCTACGTTT CTTTGCCGTC CACTCCCAAA TTACTTGGAA ATAATTTTAT TTTTGTTACC ACCGCAAATC ACTAAATCAC GTACAGTGGA GCAAAAAGGA GAAGGTCCAG GGCTAAGATG CTCACATGGC ATAGCACAGG TAGGTAACAA GATTTACTCC TTTGGTGGTG AGTTCACACC AAATCAGCCC ATCGACAAAC ACCTTTACGT CTTTGACCTC GAGACCCGGA CTTGGTCCAT CTCTCCAGCC ACCGGAGACG TTCCACACCT CTCTTGCTTA GGTGTCCGTA TGGTGTCAGT AGGATCGACC CTCTACGTCT TTGGAGGCCG AGACGCTTCA CGCCAATACA ACGGTTTCTA CTCATTTGAC ACGACCACAC ACGAGTGGAA ACTGCTAACT CCGGTCGAAG AAGGACCCAC TCCTCGTAGT TTCCACTCGA TGGCAGCCGA TGAGGAAAAC GTTTACGTTT TCGGTGGAGT GAGTGCTACG GCAAGGCTCA AGACACTAGA CTCTTACAAC ATCGTTGATA AGAAGTGGTT TCAGTGCTCG ACTCCCTTAG AGTCCCTTAC CGCAAGAGGA GGAGCAGGGC TCGAAGTGGT GAAAGGGAAG GTATGGGTTG TGTATGGATT TAACGGATGT GAAGTAGATG ATGTTTATTA CTACGATCCT GTTGAAGACA AGTGGACACA AGTGGAAACA TTCGGTGTGA GACCTTCCGA AAGGAGTGTA TTCGCTAGTG CGGCTGTTGG GAAACACATT GTGATGTTTG GAGGTGAGAT TGCGATGGAC CCACTAGCTC ACGCGGGTCC GGGTCAATTG ACCGATGGGA CTTTTGCGTT AGATACGGAG ACGTTGCAAT GGGAGAGGCT GGATAAGTTT AGTGAAGAGG AGGAGACTCC GAGTAGCAGA GGATGGACCG CGTCCACGAC TGGGACCATT GATGGTAAGA AAGGACTTGT GATGCATGGT GGTAAAGCTC CAACCAATGA CCGGTTTGAT GATCTCTTCT TTTACGGAAT CCACTCTGTC TGAATTCTGC GTTTGTGTTT GTGTGTGTGT GTGATGCAAT AAGGCAGGGG TCGTGATACC ACCATATGAT CCTTCTCAGC TTGCTCATTT ATTTTGATTT TTTTTTTTTT CTAAACGTTG TCTATATGTT TGTTTCACGT TTCGTGTTGT ATCCAATAAA TTGTTTATTT TCTT 
Length1634
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6537345.. 6539338
Download Sequence
A.thaliana
AGI-codeAT3G16410.1
Descriptionnitrile specifier protein 4
TAIR curator summaryEncodes a nitrile-specifier protein NSP4. NSP4 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.
Alias[NSP4][nitrile specifier protein 4]
Gene coexpression
MR
MR Locus Description
1 Ahg929465 nitrile specifier protein 3
4 Ahg926704 Kunitz family trypsin and protease inhibitor protein
9.38083 Ahg474366 TSK-associating protein 1
9.38083 Ahg319024 indole-3-acetic acid 7
14.6969 Ahg490462 TRICHOME BIREFRINGENCE-LIKE 26
15.748 Ahg923621 Photosystem II 5 kD protein
15.9687 Ahg946577 cellulose synthase-like A01
16.3095 Ahg482279 Caleosin-related family protein
20.1246 Ahg485048 plastid transcriptionally active 16
22.9129 Ahg926592 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression