Detail



ID : Ahg321345

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321345|fgenesh1_pm.C_scaffold_4001402
Sequence
ATGCATCACT GGGTTCAAGC TTCTTCTTCC GATTTCAGTG GAACTCCTCC GCAGGCGCGG AGTGGACATA CAGCTGTCAA TGTCGGAAAA TCCATGGTGG TGGTGTTCGG TGGTCTCGTC GATAAGAAAT TCCTCAGTGA TATAATTGTT TATGATATCG AAAACAAACT CTGGTTTGAG CCAGAGTGTA CTGGCAGCGA GTCTGAAGGA CAAGTAGGTC CTACACCGCG TGCATTTCAT GTTGCCATCA CAATCGATTG CCATATGTTC ATCTTTGGTG GACGTTCTGG TGGCAAAAGG TTGGGGGACT TCTGGGTTCT TGATACAGAT ATATGGCAGT GGTCTGAACT GACTAGCTTC GGCGACTTAC CTACACCTCG TGATTTTGCT GCTGCTGCAG CTATCGGGAA CCAAAAAATT GTATTGTGTG GCGGCTGGGA TGGTAAAAAG TGGCTGTCAG ATGTATATGT TATGGATACA ATGTCCCTTG AATGGATGGA GCTGTCGGTT TCGGGGTCAC TGCCACCTCC TAGATGTGGT CATACAGCCA CCATGGTTGA GAAACGGTTA CTTGTTTTTG GTGGCCGAGG AGGTGGTGGC CCAATCATGG GTGATTTGTG GGCTTTGAAG GGTCTGATAG ATGAAGAGCG TGAAACACCT GGATGGACCC AACTCAAGCT TCCTGGACAA GCACCATCAT CTCGATGTGG TCACACAGTT ACATCTGGAG GGCATTATCT TCTGTTGTTT GGGGGACATG GAACTGGTGG ATGGCTGAGT CGTTATGATG TCTATTATAA TGATACTATA ATTTTGGACA GAGTAACTGC TCAGTGGAAG CGTTTACCAA TAAGCAATGA GCCTCCACCT CCTCGAGCTT ACCATACCAT GACTGTTATT GGGGCTCGTC ATCTTTTAAT TGGTGGTTTT GATGGAAAAT TGACCTTCGG TGATCTCTGG TGGTTGGTTC CCGAAGATGA TCCGATAGCC AAGAGGTCTT CTGTACCTCA ACTTATAAAC CCTCCTGAAA TTAAAGAGTC AGAGAGAGAA TTGGACAAGG AAAGGGGACA AGAGGGATGC AGTATTGTTG AATTGCAAAA GAAAATGGGA ATATCTGTTT CATCAGGGTT GCGCCTTCAA ATTCCCGAGG AGTCAGAAGA TCAAGAATTC GTTGAATTAG GAACAAGATT AATTGAGGGA GATGTAGTTG ATGGCCGGGC CTCTATGATA CAGATGGCCG CTCAAGCACT TCGTCAGCAT TGGAAAGAGT CCACTCCAAG AACTTTACAA CTAAAAGATC TTGGTTCCTT ACTTCGAGAT TATCAGCGTT CTTTCTTACC CGAAAATTCA CGTGATACAC AGAGCAGCTT AACATCTACT GATTTTGGCC TCCCTGGAGC GAAGACCTTT ACGTTTTATC ATATGAAAAG CTCTTCCGAG TTGCGGATTA ATGACATCCC GAAGTTGCTG GAAGAATACA AAACCCTTCT AATCTGA 
Length1497
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16332473.. 16336911
Download Sequence
A.thaliana
AGI-codeAT2G36360.5
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.6189 Ahg945657 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)
13.6015 Ahg934359 PLAC8 family protein
28.9828 Ahg470539 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
29.2404 Ahg474911
31.241 Ahg328473 RING/U-box superfamily protein
34.4384 Ahg342166 pumilio 5
43.2435 Ahg490295 bZIP transcription factor family protein
46.3033 Ahg942960 VIRB2-interacting protein 2
55.0727 Ahg930437 AMP-dependent synthetase and ligase family protein
64.7457 Ahg919849 associated molecule with the SH3 domain of STAM 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression