Detail


ID : Ahg942960

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942960|scaffold_603504.1
Sequence
AAAGCTAAAG ATCGGTAACA ATGGCGGATG AACATAAGCA TGAAGAATCT TCACCTAATT TGGATCCAGC GGTGGAAGTT GTAGAGAGGG AATCGTTGAT GGAGAAGATA TCGGAGAAGA TTCATCACAA AGGTGATTCT TCGTCGTCGT CTTCATCAGA TGATGATGAG AAAGAAAAGA AGTCTTCTCC GTCTCCGAAG TCTTTGAAAT CGAAGGTTTA TCGTTTGTTT GGTAGAGAGA GACCTGTGCA TAAGATTCTC GGCGGTGGAA AACCGGCGGA TATATTTATG TGGAAGAACA AGAAGATGTC AGGTGGTGTA TTTGGTGGTG CTACAGTAGC GTGGGTGTTA TTTGAATTGA TGGAGTATCA TCTTCTTACT CTGCTATGTC ACGTTATGAT CGTTGCGCTT GCTGTGTTGT TTCTATGGTC TAATGCCACT ATGTTCATTC ACAAGTCTCC ACCAAAGATT CCCCAAGTAC ATATCCCTGA AGAACCTTTT CTTCAGCTTG CTTCGGGTCT TAGAATCGAA ATCAACCGTG GGTTCTCTTC TCTTCGTGAG ATTGCATCTG GAAGGGATCT CAAGAAATTC CTCTCTGCTA TTGCCGGATT GTGGGTTTTA TCAGTCTTGG GCGGATGCTG TTGTTTCTTG ACATTGGCAT ACATAGCTCT GGTTCTGCTC TTCACTGTTC CTCTTCTCTA CGACAAATAC GAAGACAAAG TAGACGCATA CGGTGAGAAA GCAATGGCGG AGTTGAAGAA GCAATACGCT GTGTTCGACG CAAAGGTATT GAGCAAAATC CCAAGGGGAC CTTTGAAAGA CAAGAAGAAG GATTAGTTTT TTTTTTTTTT TTGTGG
Length856
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7426573.. 7428038
Download Sequence
A.thaliana
AGI-codeAT4G11220.1
DescriptionVIRB2-interacting protein 2
TAIR curator summary
Alias[BTI2][RTNLB2][VIRB2-interacting protein 2][Reticulan like protein B2]
Gene coexpression
MR
MR Locus Description
6 Ahg475500 gamma-tocopherol methyltransferase
7.93725 Ahg349540 Transducin/WD40 repeat-like superfamily protein
8.06226 Ahg907188 heat shock protein 90.1
10.6771 Ahg493557 small acidic protein 1
10.9545 Ahg924040 SC35-like splicing factor 33
11.5758 Ahg900606 heat shock protein 90.1
15.7162 Ahg493600
18 Ahg920751 HCP-like superfamily protein
18.1659 Ahg495334 heat shock protein 90.1
18.2209 Ahg478478 protein phosphatase 2CA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression