Detail



ID : Ahg321463

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321463|fgenesh1_pm.C_scaffold_4001520
Sequence
ATGAAAGAGA GACAACGTTG GAGTGGTGAA GAAGATGCAT TGTTACGTGC GTACGTTAGA CAGTTCGGTC CGAGAGAATG GCATCTTGTG TCTGAGCGTA TGAACAAACC TTTGAACCGT GACGCCAAGT CTTGTTTAGA GAGATGGAAG AATTATCTTA AACCAGGGAT CAAGAAAGGT TCTTTGACTG AGGAAGAGCA GAGGCTTGTG ATCCGTCTTC AGGAGAAACA CGGCAACAAG TGGAAGAAGA TTGCTGCTGA GGTTCCCGGG AGGACGGCCA AGCGGTTAGG GAAGTGGTGG GAAGTGTTTA AGGAGAAGCA ACAGAGAGAA GAGAAAGAGA GTAACAAGAG AGTTGAGCCT ATTGACGAGA GTAAGTACGA TCGGATTCTC GAGAGTTTTG CTGAGAAGCT TGTCAAAGAG CGGTCTAACG TTGTTCCTGC TGCTGCTGCC GCTGCTGCCA CGGTTGTGAT GGCTAATTCG AATGGAGGGT TTTTACATTC TGAACAACAA GTTCAGCCTC CTAACCCGGT GATCCCGCCT TGGTTAGCTA CTTCTAATAA TGGGAACAAT GTTGTTGCCA GGCCTCCCTC GGTGACTTTA ACATTATCGC CCTCCACCGT GGCTGCAGCT GCGCCTCAAC CGCCAATCCC GTGGCTGCAG CAGCAACAGC CCGAGAGAGC AGAGAGCGGT CCTGGGGGAC TTGTGTTAGG GAGTATGATG CCGTCTTGTA GTGGGAGTAG CGAGAGTGTG TTCTTGTCAG AACTAGTGGA ATGTTGTAGA GAGTTGGAGG AAGGGCATAG AGCTTGGGCG GACCATAAGA AAGAGGCTGC ATGGAGGCTA AGGAGACTGG AGCTGCAGCT AGAGTCAGAG AAGACGTGTA GACAAAGGGA GAAGATGGAG GAGATTGAGG CAAAGATGAA AGCTCTTAGG GAAGAGCAAA AGAGCGCAAT GGAGAAGATT GAAGGAGAGT ACAGAGAACA GCTCGTTGGT TTGAGGCGAG ACGCCGAGGC CAAAGACCAG AAACTGGCTG ATCAATGGAC CTCTAAGCAT ATCAGACTCA CCAAGTTTCT TGAACAACAC ATGGGTTGCA GATTAGACCG CCCCTGA 
Length1107
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17104696.. 17105802
Download Sequence
A.thaliana
AGI-codeAT2G37630.1
Descriptionmyb-like HTH transcriptional regulator family protein
TAIR curator summaryEncodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.
Alias[AS1][ATMYB91][ATPHAN][MYB91][ASYMMETRIC LEAVES 1][MYB DOMAIN PROTEIN 91][ARABIDOPSIS PHANTASTICA-LIKE 1]
Gene coexpression
MR
MR Locus Description
28.9655 Ahg470918 syntaxin of plants 111
37.0675 Ahg483497 Actin-binding FH2 (formin homology 2) family protein
38.1838 Ahg492815 small nuclear ribonucleoprotein associated protein B
40.2492 Ahg487340 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
70.0999 Ahg489144 histone B2
76.5506 Ahg481491 Leucine-rich receptor-like protein kinase family protein
77.7496 Ahg477690 Li-tolerant lipase 1
77.7689 Ahg485528 inflorescence meristem receptor-like kinase 2
81.185 Ahg471789 XH/XS domain-containing protein
84.7467 Ahg351718 ATPase family associated with various cellular activities (AAA)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression