Detail



ID : Ahg487340

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487340|fgenesh2_kg.6__474__AT5G05480.1
Sequence
AAATGTAAAA ACGCTTTGGT GTTTAACCAC GTCACTTCTC TCTCTCCAGT CTCCATTGAA GTTTGCATCG GCGAGCTCGA ATAATCATCA AAAACACAGA AGCAATCATG CCGGAGATTA ACCAAAACGG CGCCGTTAAG TTCTTAATTA CACTTGCTTT TCTCACTGCT ACCACTGTTT CTCTTCCTTC TTCGCCGGAT CGATTCCTCA GATCGGCTTC GACTTATCTC CGGTCACCGG ACGAGCCTCA GGAGTATGAG GAGCTCAGGC GGCCCCTACC GTCCGATCAG CTAACGCCGT CATGCTCTCA CGTCCTTCTC CGCCACTCAT TTGCCAACAC CATCAATAGA CCTCCTTTTA CCACTCCATA CAGTCCACCT TCCAGCTGTA CATCGCCGCC GTGGTCTTTC GTTGTACTTG ACCTACGCGC CGCCTCGAGT GGTGATCAGT ACGATCGTAT CTCCGGTTTG TGGCTCGGCG GAGTGGAGCT ACTCCGCACA AGTACGGCGG AGCCGAGTCC ATCAGGAATC TTCTGGAATG TTCGGAAAGA CGTCTCTAGG TATTCCTCGC TCTTTATGAG ATCCGATTTA AATGTCACAA TGATGCTCGA GAACATAGTC AACGATGTTT ACACAGGCAT CTATCATATA AATGTCACCC TCATCTTCTA CGAATTCAAT CATATTGCGT CAAATTTGAA GATTAATAAC AGATTAGGCT TTGTGGAATC CCAGAGAAGA GATCAAACCC CTGCGGATTT GATAATCCCG ATAGGTGCCG GAGGGAACAG AGGGCTTTGG TTCATGATCG AGAACCCTAC AGAAACTTAC TCAAAACGAA TTCAAATTCC GTCCAACACT CGTCAGATCG TGCTGGAACT ATATGTATCG TTCCATGGAA ACGATGAGTT CTGGTATTCA AACCCGCCAA ATTCTTACAT CAGAACGAAC AATCTAGCAA CCGGGCGTGG CAATGGTGCG TACCGAGAAG TTTTTGTTAA GATAGACGGG AGATATGTGG GATCCGAGGT GCCATTCCCC GTGATCTTTA CAGGCGGAAT CAATCCCTTG TTCTGGGAAC CAGTTGTTGC AATCGGTGCA TTCAATCTAC CTTCCTACGA TATGGACTTG ACTCCATTTC TCGGGTTGCT TTTAGATGGA AAGTCTCATG AGTTTGCGTT TGGGGTCTAC GATGGGATAT CATACTGGCT TGTGGACGCA AATTTGCACC TCTGGTTAGA TCACGGGTCT TCGAATGTTG AAGCTGGGTC TAGACTTTAC GATAGCCCGA GTCGACATAT GGTGAGACAA GAAAAGTTTG AACAGCTTGA TGGGTCGTTT AGGGTTGAAG CAGAGGTAAG TAGTGAATAT GATGGCTGGG TTAGATCATG TAAAGGTAAT CTGACCACTA TGGTCAAGAG CATGTTCAAG GTTGACAGCT TGGTGAGGTT CGAGAAAAAC GGAACATACA AGAGCGTTGA GCAGAGGGTG GAGACAGAAC GGATCGTGGA GGTGACTTCT GAATCCGGTA AACCAGTGAA TCGATTTGTG CACCAGCGGA CATATCCTCT CACAGTGATC ACTTCTACTC TTAGAGGGTT AACCAAGGAT ACATATATGC TCGTGACAAA TGTTTCACAC GCCTTGAATG AGACACATTC AGATGGAGAG GCTTCGACCC AAGTTTACAA TAGACAAGAC TCAGAGGGTT GGATGGAGGT TGAAGATCAC AATGTCTTGG CCGGTGAAGC GAGCACAAGA CAGAGTCTTA GCTACATCGA TGAGTTCAGC TGTTATTCCC ACACCATCGT TGCGGCCAAT GGCGAGATTA CCCAGGACAG TTCATTCGAT TCTTGCACTT CGTCTTCATC CTCAGAGCTC AACACATTGA ATGAAACACT TGTCTTGAAT AAGAGATGCT TGTACTACTA ACCATATTCG GGGTCAAACA AAAAAACTGT TTTTGCTCAA AGGGAAACAA AATTGTAGGA TCTAAAGCAG AAACAGCAGT TACAATGCTT TTGCTTTTGT TCATTCAATT ATCCCGCTAC CTCCATCGAT ATCGACTTCT CCC 
Length2073
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1921533.. 1923600
Download Sequence
A.thaliana
AGI-codeAT5G05480.1
DescriptionPeptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg938355 Forkhead-associated (FHA) domain-containing protein
4.79583 Ahg472969 U2 snRNP auxiliary factor small subunit, putative
8.7178 Ahg483320 Leucine-rich repeat protein kinase family protein
8.94427 Ahg484593 nodulin MtN21 /EamA-like transporter family protein
9.16515 Ahg476825
10.583 Ahg487793 histone acetyltransferase of the MYST family 2
12.6886 Ahg491483 Pentatricopeptide repeat (PPR) superfamily protein
14.4914 Ahg945660 CBL-interacting protein kinase 8
17.1464 Ahg480337 aldehyde dehydrogenase 6B2
18.0278 Ahg924040 SC35-like splicing factor 33
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression