Detail



ID : Ahg323079

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323079|fgenesh1_pm.C_scaffold_5000623
Sequence
ATGATGGGAC CTCCGAGAAC ACCGTTAAGT AAGGTAGATA GGGTCAATAA TCCTTATACT CCAGGTGGTT CCAAAGTTAC AGAGGAGAAG ATTCTTGCCA CTGTTCGGAT GAGACCATTA AACTGGAGGG AACATGCCAA ATATGATCTC ATTGCATGGG AATGTCCCGA TGATCAGACC ATCGTCTTTA AGAATCCCAA TCCTGAGAGG GCTGCAACCA AATTTTCATT TGATAAAGTT TTTGAGCCAA CTTGTGCAAC TCAAGAGGTT TATGAAGGTG GTTCTAGGGA CGTCGCACTA TCTGCATTAG CAGGAACCAA TGCAACTATT TTTGCTTATG GTCAGACTAG CAGTGGCAAG ACGTTTACAA TGAGGGGAGT TACTGATAGT GTAGTTAAAG ATATATACGA GCATATAAGA AAAACTCAAG AAAGGAGCTT CGTCTTGAAA GTATCTGCTT TGGAGATCTA TAACGAGACT GTGGTTGACC TTTTAAATCG TGATACTGGG CCCCTTGGAC TGTTAGATGA TCCAGAGAAA GGAACCATTG TGGAAAATCT GGTGGAGGAA GTGGTAGAAA GCAGGCAACA CTTACAGCAT TTAATTAGCA TTTGTGAAGA TCAAAGGCAA GTAGGTGAAA CTGCTTTGAA CGACAAAAGT TCAAGATCGC ATCAGATTAT TCGGCTGACC ATCCAGAGCA GTCTCAGGGA AATAGCTGGC TGTGTGCAGT CTTTCATGGC AACTCTGAAT CTTGTTGATC TTGCTGGAAG CGAACGTGCT TGTCAAACAA ACGCAGATGG CCTAAGATTG AAGGAAGGGA GCCATATTAA CCGTAGTTTA TTGACACTTA CTACAGTAAT CAGAAAACTG AGTTCTGGAA GAAAAAGTGA TCACGTGCCA TATAGAGACT CAAAGTTGAC AAGGATTTTG CAAAATTCAC TTGGCGGGAA TGCTAGAACA GCAATTATAT GTACGATTAG CCCAGCACTC AGCCACGTTG AACAGACCAA AAAGACACTC TCTTTTGCCA TGAGTGCGAA GGAAGTCACC AACTGCGCTA AAGTGAACAT GGTTGTCTCA GAGAAAAAGT TGCTGAAACA TCTGCAGCAA AAAGTAGCCA AACTCGAGTC AGAGTTAAGA AGCCCGGAGT CCAGTTCATC TACCTGCTTA AAGTCTCTGT TAATTGAGAA AGAGATGAAA ATCCAACAGA TGGAATCCGA AATGAAAGAG CTAAAGCGTC AGAGAGACAT TGCACAATCT GAGCTTGATC TAGAAAGAAA AGCAAAGGAG CTGAAGGGGT CAAGTGAGTG TGAACCTTTT TCTCAAGTGG CAAGGTGTCT CTCCTACCAA ACTGAGGAGG AGTCCATTCC AAGCAAATCT GTTCCGTCAA GCCGCAGAAC AACTCGTGGT AGGAGAAAGG ATAATGTGAG GCAGTCTTTA ACTTCAGCGG ATCCAACAGC CTTAGTCCAA GAAATTCGTT TGCTTGAAAA ACATCAAAAG AAGTTGGGTG AGGAAGCAAA CCAAGCACTG GAGCTAATTC ATAAAGAAGT GACATCCCAT AAACTGGGTG ATCAACAAGC TGCAGAAAAA GTTGCGAAAA TGCTGTCAGA AATCCGAGAC ATGCAGAAGA GCAACCTTTT AACCGAGGAA ATTGTAGTTG GTGATAAAGC TAACTTGAAG GAAGAAATAA CCCGGTTGAA TTCTCAAGAA ATTGCAGCTT TGGAGAAGAA GCTTGAGTGT GTTCAGAACA CTATTGACAT GCTTGTCTCG TCTTTTCAGA CAGAGGAACA ACAGACTCCA GATTTCAGGA CCCAGGTGAA AAAGAAGAGA GTTCTTCCCT TCGGCTTAAG TAATAGTCCT AACATACAGC ATATGATCCG GGCACCATGT TCACCTCTTT CGTCTTCTGG GACTGAAAAT AAGGCTCCTG AGAGCAATGT TGTGTCTACT AATTCAGCCC CTGTTTCTTT TGGAGCTACT CCACCAAAGA GGGATGATAA CCGCAGTCGA ACACCGTCAA GGGAAGGAAC GCCTGTATCA CGACAAGCAA ACTCAGTTGA TGTTAAGAGA ATGAAGCGCA TGTTTAAGAA TGCTGCCGAA GAAAATATAC GTAACATCAA AGCTTATGTT ACTGGATTGA AAGAACGTGT GGCGAAGCTT CAATACCAGA AGCAGCTTCT TGTTTGCCAG GTGTTAGAAC TGGAGGCAAA CGAGACAGGT GCTGCTTCAG AGTCCGATGC AACCGATGAA TCTCAGATGG ATTGGCCCTT GTGTTTTGAA GAGCAGAGAA AGCAAATCAT AATGTTATGG CATCTGTGCC ACATTTCAAT CATTCACAGG ACACAATTCT ACATGTTATT CAAAGGAGAC CCAGCTGATC AAATCTACAT GGAAGTTGAG CTCCGCAGGC TGACATGGCT CGAACAGCAC TTGGCCGAGC TTGGGAATGC GAGTCCTGCA TTGCTTGGTG ATGAACCAGC AAGCTACGTA GCATCAAGTA TTAGAGCTTT GAAGCAGGAG AGAGAGTATT TGGCGAAACG GGTAAACACA AAGCTAGGAG CGGAGGAAAG AGAGATGCTG TACCTGAAAT GGGATGTCCC GCCGGTGGGA AAACAGAGGA GGCAACAGTT CATCAACAAA CTCTGGACAG ATCCTCACAA CATGCAGCAC GTGAGAGAGA GCGCAGAGAT CGTGGCTAAG CTTGTCGGAT TCTGTGACTC GGGAGAGAAC ATAAGAAAAG AAATGTTTGA GCTCAACTTT GCGTCTCCTT CAGATAAGAA GACATGGATG ATGGGTTGGA ACTTCATATC AAACTTGTTG CATCTCTAG 
Length2829
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9525021.. 9529613
Download Sequence
A.thaliana
AGI-codeAT3G43210.1
DescriptionATP binding microtubule motor family protein
TAIR curator summaryEncodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.
Alias[ATNACK2][NACK2][TES][ARABIDOPSIS NPK1-ACTIVATING KINESIN 2][NPK1-ACTIVATING KINESIN 2][TETRASPORE]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg473107 Apoptosis inhibitory protein 5 (API5)
19 Ahg315436 Zinc finger (C3HC4-type RING finger) family protein
33.8526 Ahg476360 pumilio 23
39.4208 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
49.3457 Ahg478692 Tetratricopeptide repeat (TPR)-like superfamily protein
52.0192 Ahg481927 Mitochondrial substrate carrier family protein
52.915 Ahg485058 Pentatricopeptide repeat (PPR) superfamily protein
60.2329 Ahg496142 nuclear RNA polymerase C1
65.5439 Ahg478522
67.1565 Ahg486430 mitochondrial ribosomal protein L51/S25/CI-B8 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression