| Annotation |
|---|
| Description | jgi|Araly1|323502|fgenesh1_pm.C_scaffold_5001046 |
| Sequence |
ATGGCGATGA TAAGCTTTTC GTTTCCATCT CCCGCCAAAC TTCCGATTAA ATCTCCACCG TCCATTTCAA ATCGGATCAA CGTCGCTGAC CGTTTGATTC TCCGTCATCT CAATGCCGGA GACCTTCGTG GAGCGGTTTC AGCTCTTGAT CTCATGGCTC GTGATGGGAT TCGTCCCATG GATTCTGTCA CTTTCTCTTC ACTCCTCAAA TCTTGTATCC GAGCACGCCA TTTTCGTCTC GGGAAACTCG TTCACGCTCG ATTAATCGAG TTTGAAATCG AGCCTGACTC GTTTATCTAC AATTCGTTGA TTAGCTTGTA TTCAAAATCT GGAGATTTGA GGAAAGCTAA GGATGTGTTT GAGACTATGG GAAGATTTGG TATGCGAGAT GTTGTTTCGT GGAGTGCGAT GATGGCTTGT TTCGGTAACA ACGGAAGAGA ATTCGATGCG ATTAAGCTTT TTGTTGAGTT TCTGGAATTG GGTTTGGTGC CTAATGATTA TTGTTACACG GCGGTGATAC GAGCTTGTTC AAATTCGGAT TTTGTTGGAG TTGGGAGAGT GATTTTAGGG TTTTTGATGA AGACTGGGTA TTTTGAATCT GATGTTTGTG TGGGTTGTTC TTTGATTGAC ATGTTTGTGA AAGGAGAGAA TAGTTTTGAG AATGCGTATA AGGTGTTTGA TAAAATGTCT GAACTAAATG TTGTTACTTG GACTTTGATG ATTACTCGGT GTATGCAAAT GGGGTTTCCT AGGGAAGCGA TTAGGTTTTT CTTGGATATG GTTTTAAGCG GATTTGAATC GGATAAGTTC ACACTAAGCT CTGTGTTTTC GGCTTGTGCT GAGTTGGAGA ATTTGTCTTT GGGAAAGCAG TTGCATTCTT GGGCTATTAG ATCAGGGCTT GTGGATGATG TTGAGTGTAG TTTAGTTGAT ATGTATGCGA AATGTTCTGC GGATGGTTCG GTAGATGACT GCAGGAAGGT GTTTGATAGA ATGCAGGATC ATAGTGTTAT GTCGTGGACG GCATTGATCA CTGGTTACAT GCAAAACTGT AATCTCGCTA CAGAGGCTAT TAATCTCTTT AGTGAAATGA TAACCCAAGG TCATGTTGAG CCAAATCATT TCACTTTTTC GAGTGCATTC AAGGCGTGTG GAAATGTTTC GGATCCACGG GTAGGTAAAC AGGTTCTTGG TCATGCTTTC AAAAGAGGAC TTGCTTCGAA TAGCAGTGTT GCAAACTCGG TTATCAGCAT GTTTGTTAAA TGTGACAGGA TGGAAGATGC TCGGACAGCT TTTGAATCAC TTTCTGAGAA AAACTTGGTC TCATATAACA CCTTTCTTGA TGGAACCTGC AGGAACTTGG ATTTTGAGCA AGCTTTTGAG CTTTTAAGTG AGATCACTGA GAGAGAATTA GGTGTTAGCG CTTTCACATT TGCTAGCTTG TTGAGTGGAG TTGCAAATGT TGGTTCAATA AGAAAAGGCG AGCAAATCCA TTCCCACGTG GTTAAACTCG GGCTCTCGTG CAATCAACCT GTCTGCAATG CTTTGATCTC TATGTATTCC AAATGCGGAA GCATTGACAC AGCTTCCCGA GTCTTCAGTT TAATGGATAA TCGTAATGTT ATCTCGTGGA CTTCAATGAT CACAGGTTTC GCTAAACACG GATTCGCTGA AAGGGTCCTC GAAACATTCA ACCAAATGAC GAAAGAAGGG GTGAAGCCAA ACGAGGTCAC TTATGTTGCA ATCTTATCAG CATGCAGCCA TGTTGGTTTG GTCTCTGAAG GATGGAGACA TTTCAATTCA ATGTATGAAG ACCACAAGAT CAAACCTAAG ATGGAGCACT ATGCTTGTAT GGTTGATCTT CTATGTCGAG CCGGGCTTCT CACAGATGCA TTTGAGTTCA TTAACACAAT GCCCTTCCAA GCCGATGTTT TAGTATGGCG TACGTTTCTT GGAGCTTGCA GAGTTCACAG TAACACAGAA CTCGGAAAGT TGGCTGCGAG GAAGATCTTA GAACTTGATC CGAATGAGCC TGCAGCTTAT ATACAGCTCT CAAACATATA CGCTAGTGCA GGGAAATGGG AAGAATCCAC GGAGATGAGG AGGAAGATGA AAGAGAGAAA CTTGGTTAAA GAAGGAGGTT GCAGTTGGAT AGAAGTGGGA GATAAGGTTC ATAAGTTCTA TGTAGGCGAT ACATCTCACC CGAATGCTCA CCAAATATAT GATGAATTGG ACCGGTTAAT TACAGAAATA AAACGCTGCG GATATGTTCC TGATACGGAT CTTGTTCTTC ACAAGCTAGA GGAAGAGGAT GATGAGGCAA AGAAGGAGAT GTTACTGTAT CAGCACAGTG AGAAAATTGC AGTTGCGTTT GGGCTTATAA GCACGGCGAA ATCTAGACCG ATGATTCAGA CAAGTTTTTG GATATTTGTG TTATTAGCAA TATCCGGTTT TTCGATTATG GAATCCCGCA TTCAAAACAA TGTGGGATCA ACAAGCATTG AAAGCAATAA GGGGATTGAA TATCTGGCGT TGAATTGTCG AAAACACAGA GCGGTTTTGA CGGATTTTGG AGCTATTGGA GATGGAAAAA CCTCAAACAC GAAAGCGTTT AGAGAAGCAA TAACCAAGCT TACTACAAAG GCGGTTGACG GTGGAGTCCA ACTCATTGTA CCGCCGGGGA ATTGGCTCAC CGGAAGTTTC AACCTCACAA GCCATTTTAC TTTGTTTATT CAGCAAGGTG CAACTATTCT TGCTTCTCAG GATGAATCTG AATATCCTAT GATTCCGCCT TTGCCGTCAT ACGGAGAGGC AAGGTTTACT AGTTTAATAT ACGGAAGTAA CCTAACTGAT GTTGTTATCA CCGACGTGAC TCTAATCAAC ACGCAATCCG CTATCCGAAT CAAAACCGCT GTGGGGCGTG GCGGTTACGT TAAAAACATT TTCGCTAGGA GATTTACAAT GAAGACAATG AAATACGTTT TCTGGATGAC CGGTTCGTAT AAATTGCATC CCGTAGGCGG ATTTGATCCT AAGGCGTTGC CGGAGATTAG CAATATCAAT TACCGTGACA TGACGGCAGA AAACGTTACG ATTTCGGCGA AGCTTGAAGG GATCAAGAAC GACCCTTTTA CAGGTTTATG CATGTCCAAT GTGACTATAG CTTTGTCACC GGACCCGAAG AAGCTGCAGT GGAACTGTAC GGATGTCTCC GGAGTTACTA GTAGGGTTAA ACCGGAGCCG TGCAGTTTGT TGCCGGATAA GGGAACTACG ATGGATTGTG ATTTTCCGAC AGATAAGATT CCTATTGAGA GTGTTGTGTT GAACAAATGT TATGCTTAA |
| Length | 3339 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 13616018.. 13621016 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G49170.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | [EMB2261][embryo defective 2261] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg929843 | |
| 6.40312 |
Ahg480596 | Pentatricopeptide repeat (PPR) superfamily protein |
| 7.4162 |
Ahg488768 | TCP-1/cpn60 chaperonin family protein |
| 7.61577 |
Ahg947406 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 9.05539 |
Ahg478184 | Pentatricopeptide repeat (PPR) superfamily protein |
| 11.6619 |
Ahg482032 | elongation factor family protein |
| 24.0832 |
Ahg946316 | Pentatricopeptide repeat (PPR) superfamily protein |
| 25.7488 |
Ahg335256 | ATP binding microtubule motor family protein |
| 32.311 |
Ahg487037 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 37.1214 |
Ahg482420 | PIN domain-like family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|