| Annotation |
|---|
| Description | jgi|Araly1|488768|fgenesh2_kg.6__1902__AT5G18820.1 |
| Sequence |
AATTAAAAAT CAAAACCCTT CGATAAACCT CCCTAACAAC CCGGAGGAGA CGAAATGTTC GCCGTTTCAC CGTCGTCCTT CTCGCCGACA ACCATATCTC CGAGCCGCAG TGGACAGAGG AACAAACCTC GAAAATTCTC GGTGGTGAGA GCAGGAGCTA AGAGAATACT GTACGGAAAA GATAGCAGAG AGGCACTCCA AGCCGGAATC GATAAGTTAG CTGATGCTGT TTCCATCACC TTAGGTCCTA GAGGGCGTAA TGTAGTGCTT GCTGAAAAAG ATACAATCAA AGTGATTAAC GATGGTGTCA CCATTGCTAA ATCTATTGAG CTTCCTGACA CGATTGAGAA CGCTGGAGCA ACATTAATCC AAGAGGTTGC GATTAAAATG AATGACTCAG CGGGTGATGG GACAACCACT GCAATCATTT TGGCTAGAGA AATGATCAAA GCTGGTTCTT TGGCTATTGC TTTTGGAGCT AATGCTGTTG CTGTGAAGAA TGGAATGAAT AAGACTGTTA AAGAGTTGGT CAGGGTGTTG CAGATGAAAA GTATTCCTGT CAAAGGGAAG AATGATGTTA AAGCCGTGGC TTCAATCTCT GCTGGCAACG ATGAATTTGT GGGGAACTTG ATTGCTGAAA CTGTGGAAAA GATTGGCCCT GATGGCGTCA TCTCCATTGA AACATCTTCC ACTTCAGAAA CGTATGTTAT AGTTGAGGAA GGAATGAAGT TTGACAAGGG CTATATGTCG CCTCATTTCA TCACAAATCA GGAGAAATCT ACTGTGGAAT TCGACAAAGC TAAAATCCTT GTGACGGATC AAAAAATCAC TTCAGCCAAA GAACTAGTTC CGTTACTGGA GAAAACCTCA CAACTGAGTG TTCCGCTCCT TATAATTGCT GAAGATATCT CAGCAGAAGT GCTTGAGATA CTGGTGGTGA ACAAGAAGCA AGGTTTGATC AATGTCGCTG TTGTGAAATG TCCTGGGATG TTGGATGGGA AAAAGGCTTT GCTGCAAGAC ATTGCACTCA TGACAGGAGC TGATTATCTT TCCGGAGATT TAGGCATGAC TCTCATGGGA GCAACTTCGG ATCAGCTGGG AGTTTCTTGG AGAGTAGTAA TTACAGCTAA TTCAACAACT ATAGTCGCGG ACGCTTCAAC TAAACCGGAG ATTCAGGCAA GAATTGCTCA GATGAAGAAG GATCTAGCTG AGACAGATAA TTCATATCTT TCAAAAAAAA TCGCAGAGAG AATTGCTAAG CTCACAGGAG GTGTGGCTGT AATAAAGGTG GGAGGTCACA CTGAAACAGA ACTTGAGGAC AGAAAACTAA GAATAGAGGA CGCGAAGAAT GCTACATTTG CAGCCATGCG AGAAGGTATA GTTCCAGGTG GTGGTGCCAC TTATATCCAT CTTTTAGATG AGATACCGAG AATCAAGAAG AATCTAATGG AAGATTCATA CGAACAAATA GGTGCAGATA TTGTAGCAAT GGCACTCATG GCACCTACAA TGGCCATAGC AACCAATGCC GGGGTTGATG GATCAGTTGT GGTGCAGAAA ACCAGAGAAC TTCAATGGAG AAGTGGTTAT AATGCAATGT CTGGAAAGTA TGAGGATCTT CTAAACGCTG GAATCGCAGA TCCTTGTCGG GTTTCAAGAT TCGCCCTCCA AAACGCGGTT TCTGTTGCCG GCATTGTTCT CACGACTCAA GCAGTGCTTG TGGAGAAGAT CAAGCAGCCT AAACCTGCCG TTCCTCAAGT TCCTGGCATA CCCACCTCAT GAACACCACC AAAGGTGACA AGCAGAAAAA CCAAACTCTT TCAGCCGATT TTGTCTGAAT CGAAACCTAT GCTCAAAAAA AACATCAAAA TCTGTGATGC AATGATATGT GCAGAGTG |
| Length | 1898 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7498048.. 7500820 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G18820.1 |
| Description | TCP-1/cpn60 chaperonin family protein |
| TAIR curator summary | |
| Alias | [Cpn60alpha2][EMB3007][chaperonin-60alpha2][embryo defective 3007] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg477752 | Pseudouridine synthase family protein |
| 3.16228 |
Ahg495573 | DEA(D/H)-box RNA helicase family protein |
| 4.24264 |
Ahg496587 | chromatin remodeling 24 |
| 4.47214 |
Ahg944981 | |
| 6.32456 |
Ahg492777 | damaged DNA binding protein 1B |
| 6.48074 |
Ahg496142 | nuclear RNA polymerase C1 |
| 7.4162 |
Ahg323502 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 9.16515 |
Ahg940793 | Pentatricopeptide repeat (PPR) superfamily protein |
| 9.27362 |
Ahg478403 | DNA GYRASE A |
| 11.8322 |
Ahg920552 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|