Detail



ID : Ahg323700

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323700|fgenesh1_pm.C_scaffold_5001244
Sequence
ATGCCTGTAT TCTTCTCTTC TCGTTTTCTC TTCTTCTCCA CCATCGTCCC CTTACTCGTC TCTATCGCTC TCTACAAACT CGACACCTTT GACCCAGCTC CGGTTCCTTC CGATGCATAC GCCTCCTCTA ATACTTCCAT CCCGCCGCTT GTCAACGACA AATCACTCAC CGGAGCTGAG TTTATCGGCG TCGGTCTTCT CGATAAACCT GAGGATATCG CCTACCATCA AGAGTCTAAT CTCATCTATA CTGGCTGCAT AGATGGATGG GTGAAACGAG TCAGTGTCCA TGACTCAGCT AATGACTCAG TCGTTGAGGA TTGGGTCAAT ACCGGCGGTA GACCTCTCGG AATCGCCTTC GGAATTCACG GCGAAGTCAT TGTTGCAGAC GCATACAAGG GACTGTTGAA CATAAGTGGT GACGGGAAGA AGACGGAATT ATTGACGGAT GAAGCGGAAG GCGTTAGATT TAAGCTGACT GATGTAGTCG CCGTTGCAGA TAACGGCGTT TTGTATTTCA CTGATGCTTC TTATAAATAC ACTCTACATC AAGTCAAATT TGACATTTTG GAAGGTAAAC CACACGGTCG TCTCATGAGC TTTGATCCCA CCACTAAAGT GACACGTGTT CTCCTCAGAG ATCTTTACTT CGCTAATGGC GTCTCCATGT CTCCTGATCA AACCCATCTC ATCTTCTGTG AAACTCCCAT GAGAAGATGC AGCAAGTATT ACATCAGTGA GGAGCGTGTA GAGGTATTCA TTCAAGGCTT ACCAGGTTAT CCAGATAATA TTCGGTACGA CGGAGATGGA CATTACTGGA TCGCTATGGT TTCGGGAGTA ACAAATTTGT GGAGGCTATC GATGAAATAC CCTTTCTTGA GGAAACTCAC AGGCATGGCG GCTAAGTATG GCGTGGAACT TATGTTTATG AAGAATGCAG GCGTTTTGCA GGTTGATTTG GATGGGAATC CCATCGCATA CTACTATGAT CAGAGACTCT CTCACATAAC CACCGGTGTC AAGATTGGGA ACTATCTCTA TTGTGGAAAT ATCTTGCATT CACACATTAT CCGACTCGAT CTTTTGAAAT ATCCTGCACA GAAGAAGAAG AAGCTTTGA 
Length1119
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14770510.. 14771905
Download Sequence
A.thaliana
AGI-codeAT3G51430.1
DescriptionCalcium-dependent phosphotriesterase superfamily protein
TAIR curator summaryAlthough this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.
Alias[SSL5][YLS2][STRICTOSIDINE SYNTHASE-LIKE 5][YELLOW-LEAF-SPECIFIC GENE 2]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg489414 CHY-type/CTCHY-type/RING-type Zinc finger protein
16 Ahg484422 Tetratricopeptide repeat (TPR)-like superfamily protein
16.6132 Ahg490963 GRAS family transcription factor
18.3848 Ahg478844 phosphatidylinositol-4-phosphate 5-kinase family protein
26.4953 Ahg489182 DNAJ heat shock N-terminal domain-containing protein
27.6406 Ahg485445 Phosphatidic acid phosphatase (PAP2) family protein
40.7308 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
41.2068 Ahg482234 PDI-like 2-3
42.7434 Ahg889863 PAS domain-containing protein tyrosine kinase family protein
43.359 Ahg945393 fimbrin 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression