| Annotation |
|---|
| Description | jgi|Araly1|478844|fgenesh2_kg.3__1545__AT3G14270.1 |
| Sequence |
AAAATTCGAG TATTGAAGAC GACGACGACG ATCTTCTGGG TGAATCAGAG TGAGAGGTTA AGCTCAAGGT CTCTGGATTG CTCTTTAATT TGCCTGCTAT TGGAGGGGAT GATAGACCAT CGGTATGTGC TTGAGTTTTC TCCAGGAAGG ATGAATCGAT ACGAGCCATC TTATTGATTT ATTATATGTA GCTGAGTGCC TGAAGGAGAT ATAGTAGGTA GCAGTTGGAT ATTAGGGTTT CCATTTGTTA GGTGTTGAGC TTTGTTGTTC ATTTGGATTC TAGACTTCCA TGACCATCGG AGCATGATGG TTTGGAAGAT TTTAGATGGG TACAAGAGAT AGTAATAGGA CATTCTCTGA GATAGTGGGT CTGATTAAAT CCTGGCTTCC CTGGCGATCC GAGCCAGCTA CTGTGTCCAG GGATTTTTGG ATGCCTGATC AGAGCTGTCG TGTATGTTAC GAGTGTGATT GTCAGTTTAC CCTCATCAAT CGTAGGCACC ATTGTCGTCT TTGTGGCAGA GTTTTCTGCG GCAAGTGTAC AGCCAACTCA GTACCTTTTG CTCCCAGCGA CTTGAGAACT CCTCGTGAAG AGTGGGAGAG GATCCGTGTT TGCAATTATT GTTTCAGGCA GTGGGAGCAA GGTGATGGTG GACCACATGT TTCAAATATC ACGGAACTTA GTACTTCACC TTCAGAGACA AGTCTTCTTA GCTCAAAGAC CAGTACAACT GCCAATAGTA GTAGCTTCGC TCTTGGCTCG ATGCCAGGAC TGATTGGTCC TTGTCATAGG GTTCATCATG GTTCTGATGT CAGCTTGCAC GGAGTATCTT CAATGGAAAC AAGCACAACC AGGCAAGGCA AAGAAACTTC GAGGAGGACC AGCTTCATTG CCACAGATGT GGAAGATCCA TCTCGCTTTG CTTTAAATAG GAGTGATGAT GAGTACGACG AGTATGGTGT ATACCAGACT GATATTGAGA CGAGTCATTC TCCTCGAGCT AATGAATATT ATGGTCCCAT GGAATACAAT GGAATGAGCA TTGATGATGG CCCCTGTAAG CATCTGAGTG GAGAAACCGC TGACCAGAAA AGTTTGAGCG GCTCTCCACT CATTCATCAG TGTCTTGAAT CTCTGATTCG GGAAGGATCA GAGCAATTCC AGAAGAAAGG TGAGCATGAT GGTCGTGACG AATGTGAAGC TTCTTCTCCA GCAGATATTT CAGATGATCA AGTGGTAGAA CCAGTGGATT TCGAGAACAA TGGACTTTTG TGGGTTCCAC CTGATCCAGA AAATGAAGAA GACGAAAGAG AAAGTGCTTT GTTTGATGAG GAAGATAACG AGGGAGATGC CTCAGGTGAG TGGGGATACT TACGACCTTC CACTAGCTTT GGAAGTGGAG AGTACCGTGG CGAGGATCGA ACAACTGAAG AGCACAAGAA GGCTATGAAG AATGTGGTTG ATGGGCACTT TAGGGCTTTG CTTGCACAAC TGTTGCAAGT TGAGAACATC TCTGTGAGCG ATGAAGAGGG CAAAGAGAGC TGGTTAGAGA TTATCACCTC TCTTTCTTGG GAGGCTGCTA ACTTATTGAA GCCTGATATG AGCAAAAGTG GAGGAATGGA TCCTGGTGGC TATGTCAAAG TAAAGTGCCT AGCTTCTGGA TTTCGACATG ATAGCATGGT GGTGAAGGGA GTTGTTTGCA AGAAAAATGT TGCTCATAAG AAAATGAGTA CGAAGATTGA GAAAGCTCGA CTTTTGATTC TAGGCGGTGG ACTTGAGTAT CAAAGGGTCT CAAATCAGTT ATCAAGTTTT GATACATTGC TGCAACAGGA AAAGGATCAT CTAAAGATGG CTGTTGCTAA GATTCATGCT GAACGTCCAA ATATTCTACT AGTCGAAAAA TCAGTTTCTC GATTTGCGCA AGAATATCTT CTAGCCAAAG ACATATCTGT TGTTCTAAAC ATCAAGAGGC CACTTCTAGA CCGCATTGCT CGCTGCACTG GTGCTCAAAT AATTCCTTCA GTAGACCACC TCTCCTCTCA AAAGCTGGGT TACTGTGAGA ATTTTCGGGT GGATAGGTTT TTTGAGGAAC ATGATTCAAC TGGTCAAGTT GGAAAGAAAG TGGCGAAGAC GTTGATGTAT TTTGAGCATT GTCCAAAACC ATTAGGCTTT ACAATTTTGC TTAGGGGTGC AAATGAAGAT GAGTTGAAAA AAGTGAAGCA TGTGGTCCAA TATGGAGTTT TTGCAGCTTA TCATTTGGCA CTCGAAACAT CATTTCTTGC TGATGAGGGA GCCTCACCAG AACTTCCTTT GAATTCCCCG ATTACGGTGG CACTTCCGGA TAAATCTACG AGCATTGAAC GTTCAATATC TACTGTGCCA GGTTTCACGG TCTCAACATA TGAAAAATCT CCGACAATGC TATCTTGTGC TGAACCACAA CGAGCAAACA GTGTTCCAGT ATCAGAGTTG CTCTCGACCA CTACCAATCT ATCCATCCAG AAGGATGCAA ACCCTCTTAT ACCCAATGGT TCAGGCTGGC AGGCTAGAGA AATAAACCCG AGTTTCATCT TTTCACGCCA TAATGTTTCA TTGAATTTGC CTGACCGTGT GATAGAGAGC AGAAACTCAG ATTTGTCTGG AAGATCTGTA CCGGTGGACA CACCAGTTGA CAAAACCAAT CCAGTTGTTG CGGCAGATGA CACATTGGAA AATTCCTTAC ATTCATCAGG GCAAGGCTTT GTGCGAAAGA GTTCTCAAAG TGGTACGAGC ATTATGGTCG AAAACCAAGA CAATGGTTCA GAGCTTACAA CCGTCCAACA ACAAAACAAT GAGAAACCAA AGGAAACACA ATCCCAAAAA GAAGAATTTC CTCCGTCACC CTCTGACCAC CAGAGCATTT TGGTTTCTCT ATCTTCCCGA TCAGTGTGGA AAGGAACTGT GTGTGAGAGG TCTCACCTCT TTCGGATTAA ATACTATGGT AGTTTTGATA AACCCTTGGG ACGGTTCTTG AGAGATCATT TGTTCGATCA GAGTTACAGG TGCCGGTCAT GTGAGATGCC ATCAGAAGCT CATGTTCATT GTTACACTCA TCGACAAGGC AGCCTTACTA TATCTGTCAA GAAGCTCCAA GATTATCTCT TACCTGGTGA AAAGGAGGGG AAGATCTGGA TGTGGCATAG ATGCCTGAGA TGCCCGCGAC CTAACGGCTT CCCTCCAGCG ACTCTACGAG TGGTTATGTC TGATGCTGCA TGGGGATTAT CGTTTGGGAA GTTTCTGGAG CTCAGTTTCT CAAATCACGC AGCTGCTAGT AGAGTAGCTT GTTGTGGCCA TTCTCTGCAT AGAGATTGTC TTCGCTTCTA TGGCTTTGGG AACATGGTTG CTTGCTTCCG GTACGCTACT ATAGATGTTC ATTCGGTCTA CCTTCCACCA TCAATTCTTA GTTTCAACTA TGAGAATCAG GACTGGATAC AGAGAGAGAC AGATGAGGTG ATAGAGAGAG CAGAGCTTCT GTTTTCTGAA GTATTAAATG CTATTAGTCA AATTGCAGAG AAAGGTTTTA GGCGTCGAAT TGGTGAACTC GAAGAAGTGC TGCAAAGAGA GAAATCAGAA TTTGAGGAAA ATATGCAAAA GATGTTGCAC AGGGAGGTGA ACGAAGGCCA ACCTCTCGTG GACATTCTTG AGCTATATCG GATTCGCAGA CAACTGCTTT TTCAGTCATA CATGTGGGAT CACCGCTTGA TTAATGCATC TACTTTACAT AAGCTTGAGA ATAGTGATGA CACAAAGAGA GAAGAGAACG AGAAACCTCC CTTGGCTAAG AGCCAGACGC TCCCCGAGAT GAATGCTGGG ACCAACTCTC TTCTTACTGG CTCAGAAGTT AATCTGAATC CTGATGGTGA TTCTACTGGT GACACTGGCT CCTTAAATAA TGTTCAGAAG GAAGCGGATA CAAATTCAGA TTTGAATCAG GAAAAGAATG ATGGGGGAGA AGTTTCTCCC AGCAAGACCT TACCAGATAC ATCTTATCCT CTGGAAAATA AAGTCGATGT TCGTAGAACA CAGTCTGATG GCCAGATAGT TATGAAAAAT CTATCAGCCA CTCTTGATGC AGCATGGATA GGTGAACGTC AAACATCTGT GGAGATTCCA ACCAACAATA AGGTCTTGCT TCCTCCTTCC ACCATGTCAA ACTCTTCAAC TTTTCCTCCA ATCTCAGAGG GGCTAATGCC TATAGATCTC CCAGAACAGC AAAATGAATT CAAGGTGGCC TATCCTGTTT CCCCAGCATT ACCAAGTAAG AATTATGAGA ATTCAGAAGA CTCTGTCAGC TGGTTAAGTG TGCCATTCCT CAACTTTTAC CGTTCCATTA ACAAGAATTT CCTGCTTAGC TCTCAGAAGC TTGATACATT TGGCGAGCAT AGCCCTATCT ATATTTCATC TTTTAGAGAG GCAGAACTTC AAGGTGGACC AAGGCTACTT CTGCCCGTAG GCTTAAATGA TATTGTTGTT CCGGTATATG ATGATGAACC CACTAGTATG ATCGCATATG CCTTGATGTC ACCGGAATAT CAACGCCAAA CTTCTGTTGA AGGGGAATCT CTAGTTTCAT ATCCTTCTGA ACTCAATATC CCTCGCCCAG TTGATGACAC CATTTTTGAC CCTAGCAGAA GCAATGGTTC AGTCGACGAG AGCATACTTT CAATATCCTC ATCTCGCAGT AGCTCACTTT TGGACCCACT ATCATATACA AAAGCTTTAC ATGCTCGAGT CTCATATGGA GAGGACGGTA CGCTTGGAAA AGTGAAGTAC ACTGTTACTT GTTACTATGC AAAACGATTT GAGGCGCTGC GGGGTATATG TCTCCCTTCG GAACTTGAGT TTATAAGGTC TCTTAGCCGG TGTAAAAAAT GGGGAGCTCA AGGTGGCAAG AGCAATGTCT TCTTTGCTAA AACCCTGGAT GATCGATTTA TCATCAAGCA AGTCACCAAG ACAGAGTTGG AATCATTCAT CAAATTTGCA CCTGCTTACT TCAAATACTT ATCTGAGTCT ATCAGCACGA AAAGCCCAAC CTGCCTGGCA AAAATATTGG GAATCTATCA GGTCGCAACA AAGCAACTTA AGAGCGGGAA AGAAACAAAG ATGGATGTTC TGATTATGGA GAATCTTCTG TTTGGAAGAA CTGTGAAACG GCTATATGAC CTTAAAGGAT CTTCCCGGGC GCGCTACAAT CCTGACTCCA GTGGGAGCAA CAAAGTCTTG TTGGATCAAA ACTTGATTGA AGCAATGCCA ACTTCTCCCA TTTTCGTCGG TAACAAAGCA AAACGATTGT TGGAAAGAGC CGTCTGGAAC GATACTGCTT TTCTTGCATT GGGTGATGTG ATGGATTATT CGTTGCTAGT AGGCGTGGAT GAAGAAAAGA ACGAGCTAGT TCTCGGGATT ATCGACTTCT TGAGGCAGTA CACATGGGAC AAGCATCTAG AGTCTTGGGT GAAATTTACA GGAATCTTAG GAGGACCAAA GAATGAAGCA CCAACAGTAA TATCTCCAAA GCAATACAAG AGAAGATTCA GAAAGGCGAT GACAACTTAC TTCCTTATGG TCCCTGATCA ATGGTCTCCG CCTAATGTCG TTGCGAATAA CTCCAGGTCT GATCAACCTG AAGAAACCTC TCAAGCCGGT ACACAAGCAG AGTGATACAA GA |
| Length | 5702 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5641547.. 5648861 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G14270.1 |
| Description | phosphatidylinositol-4-phosphate 5-kinase family protein |
| TAIR curator summary | Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. |
| Alias | [FAB1B][FORMS APLOID AND BINUCLEATE CELLS 1B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.63325 |
Ahg935061 | phospholipase D beta 1 |
| 7.61577 |
Ahg493559 | |
| 9.38083 |
Ahg476358 | Leucine-rich receptor-like protein kinase family protein |
| 9.43398 |
Ahg475859 | PLAT/LH2 domain-containing lipoxygenase family protein |
| 11.3137 |
Ahg481396 | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related |
| 12.5698 |
Ahg944213 | other RNA |
| 14.3875 |
Ahg476140 | |
| 16.4317 |
Ahg481806 | CAX interacting protein 4 |
| 17.1756 |
Ahg889083 | diacylglycerol kinase 7 |
| 18.3848 |
Ahg323700 | Calcium-dependent phosphotriesterase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|