| Annotation |
|---|
| Description | jgi|Araly1|323856|fgenesh1_pm.C_scaffold_5001400 |
| Sequence |
ATGGCGGATA CTGTAGAGAA AGTTCCCACC GTTGAGTCAT CTTCATCTTC CTCCGTTGAA GCATCTATTA GCACCGAGAA GACTGAGCCC ACGACGGAGA AGAAAAAGTG GGGCGATGTT GAGGATGATG ATGATGAAGA AGAAGCAGTA TCGGAGCTTA ATTCTTTGAG CATTAAGGAA GAAGAGAAAC GTGATTCTGT GCTTGAGGAA CCTGAAGATT CAAACATCAA AGCTGTTACT TCTGGTGACA CACCATATAC ATCAGCAAGT AGATTTGAAG ACTTGAACTT GTCACCTGAA TTGATGAAAG GCTTGTATGT TGAGATGAAA TTCGAAAAGC CGAGCAAGAT CCAAGCAATC AGTTTGCCCA TGATTATGAC GCCGCCTCAC AAGCATTTGA TTGCTCAGGC GCATAACGGA TCTGGAAAGA CGACTTGTTT CGTTCTTGGA ATGTTGAGTC GGGTTGATCC GACACTGAGA GAACCTCAAG CGCTCTGTAT TTGTCCCACT AGAGAATTAG CTAATCAGAA TATGGAAGTT CTTCAGAAGA TGGGGAAGTA TACTGGGATC ACTGCTGAGT TGGCTGTGCC AGAGTCAACG AGAGGCGCAT CACCGGCCCC AAGACGAGCT CCTGTTTCTG CTCATGTTGT GATTGGTACC CCTGGAACGC TTAAGAAGTG GATGGCTTTT AAGAAACTAG GTCTAAATCA TTTGAAGATT CTTGTTTTTG ATGAGGCTGA CCATATGCTT GCTACGGATG GCTTTAGGGA TGATTCCTTG AAGATAATGA AAGACATTGG GAGAGTTAAT CCCAATTTCC AGGTTCTTCT TTTCTCGGCA ACTTTTAACG AAATTGTCAA AGATTTTGTT GCAAGGACAG TCAAAGATCC CAACCAATTG TTTGTCAAAA GAGAGGATCT GGCTTTGGAC TCAGTGAAGC AGTATAAAGT TGTTTGCCCA AAGGAGCAAA ACAAGATCGA AGTCATCAAG GATCAGATTA TGGAGCTTGG TGATATTGGG CAAACCATTA TCTTTGTGAA AACAAAAGCG TCTGCTCACA AGGTACACAA AGCCCTTGCG GAAATGGGAT ATGACGTTAC CAGTGTCCAT GGTAATCTGT CTGAATCGGA CAGGGATAAG ATAGTTAAAG AGTTTAAAGA TTGCCTTACT CAAGTGCTCA TTGCTACCGA TGTCATTGCA AGAGGTTTTG ACCAACAGCG GGTGAATTTG GTTGTCAATT ATAATCTTCC CACTAAATAT GACACCGGAG AGCCAGATTA TGAGGTGTAC CTTCACAGGG TTGGGAGAGC TGGCCGGTTT GGTCGTAAAG GAGCGGTATT CAACTTGCTG CTTGATGATG GCTGGGATAA AGAGGTGATG GAGAAGATCG AGAAGTATTT TGAAGCAAAT GTTAAGGAGA TCAAGTCTTG GAACTCAGAG GAAGAGTATA AGAGTGCATT AAAGGAAGCT GGCCTGCTCA ACGAGTGA |
| Length | 1488 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15544668.. 15547166 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G53110.1 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| TAIR curator summary | Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. |
| Alias | [LOS4][LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg943470 | cullin 1 |
| 7.68115 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 9.16515 |
Ahg480909 | Tetraspanin family protein |
| 14.2127 |
Ahg909175 | Transcription initiation factor IIF, beta subunit |
| 14.4914 |
Ahg941505 | aspartate aminotransferase 2 |
| 14.4914 |
Ahg938922 | glucan synthase-like 11 |
| 15.4919 |
Ahg940290 | mRNA splicing factor, thioredoxin-like U5 snRNP |
| 16.6132 |
Ahg919087 | multidrug resistance-associated protein 5 |
| 17.6068 |
Ahg949213 | GRAS family transcription factor |
| 18.1108 |
Ahg926235 | eukaryotic elongation factor 5A-3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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