| Annotation |
|---|
| Description | jgi|Araly1|943470|scaffold_604014.1 |
| Sequence |
CTTGGAAAGT TGTTTGTCAA CATGGAGCGC AAGACTATTG ACTTGGAGCA AGGATGGGAC TATATGCAGA CTGGGATTAC CAAGCTGAAA CGGATTCTGG AAGGATTGCC TGAGCCAGCA TTTGACTCTG AGCAATATAT GATGCTCTAC ACGACTATCT ACAACATGTG CACCCAGAAA CCTCCTCATG ATTACTCACA GCAGCTTTAC GACAAGTACC GTGAAGCATT TGAGGAATAT ATTAACTCAA CAGTTTTGCC TGCTTTGAGG GAGAAGCATG ATGAATACAT GCTGCGGGAG CTGGTTAAAA GATGGTCGAA CCATAAAGTT ATGGTTAGAT GGCTATCCCG CTTCTTCTAC TATCTTGACC GTTACTTCAT TGCTCGGAGA TCACTTCCAC CACTGAATGA AGTTGGCTTG ACATGCTTCC GTGACCTGGT TTATAATGAG TTGCATTCTA AGGTCAAAGA AGCTGTAATA GCACTTGTTG ATAAAGAACG GGAGGGCGAG CAGATTGATA GGGCTCTACT GAAAAACGTA TTAGATATCT ATGTCGAGAT TGGAATGGGA CAGATGGAAA GATATGAAGA AGATTTTGAA AGCTTCATGC TTCAGGATAC ATCATCTTAC TATTCTCGCA AGGCATCAAG CTGGATTCAG GAAGATTCTT GCCCTGATTA CATGTTGAAG TCTGAAGAAT GTCTAAAGAA GGAGAGGGAG AGGGTGACTC ACTACCTTCA CTCAAGCAGT GAGCCAAAGC TGGTTGAGAA AGTACAACAT GAATTGCTGG TAGTGTATGC AAGTCAACTT CTAGAAAAAG AGCACTCAGG GTGCCGTGCA TTGCTAAGAG ATGACAAGGT CGATGATCTC TCCAGGATGT ACAGGCTTTA CCATAAAATT GTGCGAGGTT TGGAACCTGT TGCAAACATC TTTAAGCAGC ATGTCACAGC AGAGGGTAAC ACTCTTGTCC AACAGGCCGA AGACACGGCT ACAAATCAGG CTGCAAATAC TGCTAGCGTC CAGGAACAGG TTCTTATCAG AAAAGTGATT GAACTTCATG ATAAATACAT GGTATATGTC ACAGAATGTT TCCAGAACCA CACCCTCTTC CATAAGGCTT TGAAAGAGGC ATTTGAGATT TTCTGTAACA AAACGGTAGC TGGAAGTTCA AGTGCAGAAC TACTTGCAAC TTTTTGCGAC AATATTCTCA AGAAGGGGGG AAGTGAAAAA CTGAGTGACG AAGCTATTGA AGATACACTT GAGAAGGTGG TCAAATTGCT TGCATACATA AGTGACAAGG ATCTTTTTGC TGAGTTCTAC AGGAAGAAGC TGGCCCGTAG GCTCTTATTT GATCGCAGTG CTAATGATGA TCATGAGCGA AGTATCCTTA CAAAACTCAA GCAACAATGT GGTGGACAGT TTACTTCTAA GATGGAGGGC ATGGTGACGG ATTTGACATT GGCTAGAGAA AACCAAAACA GTTTCGAGGA TTATCTAGGC AATAACCCTG CTGCAAACCC TGGGATTGAT TTGACTGTCA CTGTTCTTAC CACTGGTTTC TGGCCTAGTT ACAAATCATT TGACATAAAT CTACCTAGTG AAATGATCAA GTGTGTTGAA GTCTTCAAAG GGTTTTATGA AACGAAAACG AAACACAGGA AGCTTACCTG GATCTATTCA CTGGGAACTT GTCACATCAA CGGGAAGTTT GACCAAAAGT CCATCGAGTT AATTGTGTCT ACTTACCAGG CTGCTGTGCT TCTACTCTTC AACACAACTG ACAAGTTAAA TTACACTGAG ATCTTGGCTC AACTAAACCT AAGCCATGAA GATCTAGTTA GGTTGCTTCA TTCCTTGTCA TGTGCTAAGT ACAAGATTCT CCTTAAGGAG CCAAGCACCA AGACTGTCTC CCAGACTGAT GTCTTTGAGT TCAACTCCAA ATTCACCGAT AGGATGCGCA GAATCAAGAT CCCTCTTCCC CCAGTTGATG AAAGGAAGAA AGTCGTTGAA GATGTCGATA AAGACAGACG CTATGCAATT GATGCTGCCA TTGTCAGGAT CATGAAGAGC AGGAAAGTAT TGGGACATCA ACAGCTTGTT TCTGAGTGTG TTGAGCAACT TAGCCGAATG TTCAAGCCTG ATATCAAAGC AATCAAGAAA CGTATGGAGG ATTTAATAAC CAGAGATTAT TTGGAGAGGG ACAAGGAGAA TCCTAACATG TTTAGGTACT TGGCTTAGGG CAAAACAACT ATGGAAGT |
| Length | 2258 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 22161976.. 22166124 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G02570.1 |
| Description | cullin 1 |
| TAIR curator summary | Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. |
| Alias | [ATCUL1][AXR6][CUL1][cullin 1][AUXIN RESISTANT 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg472815 | phytochrome and flowering time regulatory protein (PFT1) |
| 2.82843 |
Ahg472334 | U5 small nuclear ribonucleoprotein helicase, putative |
| 4.69042 |
Ahg479911 | Beta-glucosidase, GBA2 type family protein |
| 4.89898 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| 5.09902 |
Ahg323856 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 6.78233 |
Ahg903021 | auxin transport protein (BIG) |
| 6.9282 |
Ahg940290 | mRNA splicing factor, thioredoxin-like U5 snRNP |
| 7.07107 |
Ahg490770 | peroxisomal ABC transporter 1 |
| 7.93725 |
Ahg939446 | transducin family protein / WD-40 repeat family protein |
| 9.16515 |
Ahg479191 | ubiquitin protein ligase 6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|