Detail



ID : Ahg324014

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324014|fgenesh1_pm.C_scaffold_5001558
Sequence
ATGAATCACT CGGCTTCTGA TCAGAGCCTC TACATCGAGA GTGATGAAGG AGATGACGAG AGAAAACACT TGTCAGACGA TGAAGACGAC GATGGAACAC TTTCTGATTC TTCTGACGCT TACAATCAAA ACCAACATCT ATCTAAAGCT AGCCCATACT CAACGGCATG GCCAAAGAGT TATAGGCAAT CGATTGATAT GTTTGGAAGT GTACCAATAC CATCACCAAA TTTGGGTTTT CTTGCTAATT CTTCAATGTC GAGAGTAGGA AGCTCTTTCT TGTCTTCGAC ACTGACAAGA AGACATACTC CAGAATCATT ACCATGTGTT ACAAAACCTC TCCTAGTAGA TGAAGAAGCA CCAAAGCATA AGCATAGCTC TCATTCCCTG CTTCCGTTGA AACCATCATC CATGGTGTCT CATGAAATGG CAATCTCCAA TGATAGCTCG TTTGGACAGG CTGTTCTTAA TGGAGTGAAT GTTTTATGTG GGGTTGGAAT ATTGTCAACA CCATATGCTG TGAAGGAAGG AGGATGGTTG GGACTTATCA TTCTCTTTGC ATTTGGTATT CTTTGTTTTT ACACCGGTTT GCTTTTGCGG TACTGCCTCG ATAGCCACCC CGATGTCCAG ACCTATCCTG ATATTGGCCA TGCCGCTTTT GGTTCCACCG GCCGCATCCT GGTCTCTGTA ATACTCTATA TGGAGCTATA TGCTATGAGT GTTGAATACA TAATTTTGGA AGGTGATAAT CTTTCATCAA TGTTTCCAAA TGCTAGTCTA AGTATTGGAG GGTTTCACTT AGATGCGCCT CGTCTATTTG CTCTGCTTAC CACCCTCGCT GTTCTCCCAA CCGTATGGCT TCGAGACCTC AGCGTACTAA GTTACATATC AGCTGGAGGG GTGATTGCAT CAGTGTTGGT GGTTTTGTGC TTGTTTTGGG TTGGTTTGGT TGATGATGTT GGTATTCACA GCAAAGGAAC TCCACTAAAC CTCGCAACAT TGCCGGTTTC TGTAGGACTC TATGGTTATT GTTACTCAGG ACATGGTGTT TTCCCAAATA TATATACTTC TATGGCCAAA CCATCTCAAT TTCCTGCTGT TCTCTTGGCA TCTTTTGGAA TTTGCACTCT GATGTATGCG GCTGTGGCTG TTATGGGATA TAGCATGTTT GGAGAATCAA CAGAATCACA GTTTACTCTT AACCTGCCTC AAGATTTGGT TGCATCTAAG ATTGCTTTGT GGACTACAAA AGAAAGCACA TATGCTTTGA CATTATCTCC GGTTGCAATG AGTCTTGAGG AGTTAATACC ATCAAACCAT GGGAAGTCAC GTTTCTACTC AATCGCCATT AGAAGTGCAT TAGCCTTCTC TACTCTGCTC GTTGGTCTTG CGATTCCCTT CTTCGACGCT GATACTACCG CCAGCTTGTT TCTTAAGCAT CTTAAGGCGA AAAGTAACCC CTACTCAGAT CTTGTATCAC AGACCTTGCA AGTGAAGACC ATCATGAAAT CATGCCGCGG GTTTATTTTT AACTGGGACT TGTACTTCAC CATCATTTCC TCAGAGGCCG TCGCAGCGGA GGGAACTTTG GCCGTTTCAG TAGCAGAGTT TGAAGAGTTG CAGACATTGG TTACTGGAGC TTCATTTGCC TCACGGATGA CAGATAATTG TCTCTGA 
Length1677
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16242482.. 16246318
Download Sequence
A.thaliana
AGI-codeAT3G54830.1
DescriptionTransmembrane amino acid transporter family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.7178 Ahg494424 protein dimerizations
14.8997 Ahg479519 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
19.6214 Ahg320032 Cysteine/Histidine-rich C1 domain family protein
25.4951 Ahg492529 Disease resistance protein (TIR-NBS class)
28.9828 Ahg933711 homologue of trithorax
29.4618 Ahg334090 tyrosylprotein sulfotransferase
34.2491 Ahg492932 GDA1/CD39 nucleoside phosphatase family protein
41.4246 Ahg489409 Protein phosphatase 2A regulatory B subunit family protein
41.8927 Ahg487022 Dof-type zinc finger DNA-binding family protein
44.6094 Ahg932772 haloacid dehalogenase-like hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression