| Annotation |
|---|
| Description | jgi|Araly1|933711|scaffold_401699.1 |
| Sequence |
TCTCCTTCCG AATAATCTCC ATGGCTTGTG TTTCGAATGA TACCCAGATC GAAATTGATG TTCACGACCT CGTGGATGCT CCAATTCGTT ACGATTCTAT TGAGAGTATG TACTCTGTTT CCTCGTCGGC TTTGTGCTGT GTTAATGCCG TTGGTTCTCA CAGTCTGATG TCTAAGAAGG TTAAGGCCCA GAAGCTTCCG ATGATTGAGC AATTTGAGGT TGAAGGTAGC GGCGTGAGTG CTAGTGCCGA TTGTTGTCGT TCGGATGATT ACAAGTTGCG GACTCAGCGT CCTGAGATTG TTCGCGTCTA CTATCGTCGC CGTAAGAGGC CGCAGCGGGA GGTTTTGCTA GATCAGGCGG TGGCTGTGAA GACTGAAAGC GTGGAGCTTG ATGAAATTGA TTGTTTTGAG GAGAAGAAGA AAAGGAAGAT TGGTAATTGC GAGTTGGTGA AATCGGGTAT GGATTCTATT GGTTTAAGAA GGTGTAAGGA TAACAATGCG TTTAGTGGAA ATAAGCAAAA TGGGTCGTCC CGAAGGAAGG GGTCTTCTAT CAAGAATCAG GACAAGGTGT CTTTAGCTTC TCGTTCAGCT AAGAAATGGG TCAGGTTGAG TTATGATGGT GCAGATCCTA CAAGTTTCAT AGGGCTGCAA TGCAAGGTTT TTTGGCCACT GGACGCTCTT TGGTATGAAG GTTCTATCGT TGGATATAGT GCCGAGAGAA AGCGTCATAC TGCTAAATAT GGGGATGGAT ATGATGAGGA TATAATTCTT GATCGTGAAA TGATCAAATT TTTGGTTTCT CGTGAAGAGA TGGAGCTGTT ACATCTGAAG TTGTGTACTA GTGATGTAAC TGTTGGTGGC CGTGATTACG ATGAGATGGT TGTATTGGCA GCTACTCTGG AGGGATGTCA AGATTTTGAG ACTGGTGACA TTGTATGGGC AAAACTAGCT GGTCATGCTA TGTGGCCAGC AGTTATTGTA GATGAATCCG TTATCGGAGA GCGGAAAGGT CTAAACAACA AGGTATCTGG AGGAGGATCA CTCTTGGTCC AGTTTTTTGG CACTCATGAT TTTGCTAGAA TAAAAGAAAA GCAAGCAATC TCGTTTATCA AAGGGCTTCT CTCGCCATCT CACCTGAAGT GCAAACAACC GCGGTTTGAA GAGGGCATGC AGGAAGCAAA AATGTATCTG AAGGAACATA GGCTTCCAGA AAGGATGAGT CAACTTCAAA AAGGAGCTGA TGTCGATTCT GAAATCGCTA ATAGTACAGA AGAGGGAAAC TTGGGTGGTG ATCTTTTTAA TGATGGAGAA GTGTGGTTGA GACCAACAGA ACATGTAGAC TTCCTTCATA CAATAGGGGA TCTGCAAATA ATAAATCTTG GAAAGGTTGT GACAGACTCT CAGTTTTTCA AGGATGAGAA TCATATTTGG CCTGAAGGGT ATACGGCTAT GAGAAAGTTC ACATCACTAA AAGATCATAG TGTGTCTGCT TTGTACAAGA TGGAAGTGCT CAGAGATGCC GAGTCAAAGA CTCGCCCTCT GTTTAGAGTG ACTGCAGATA GTGGAGAGCA GTTCAAAGGG CTTACTCCAT CGGCCTGCTG GAATAAGATA TATAACAGGA TAAGAAAGGT CCAGAATTCT ACTGATGATC CTAATGTTTT GGGGGAGGAA CTAAATGGAT CTGGTACAGA TATGTTTGGT CTTTCCAACC CGGAAGTCAT TAAACTTGTA CAGGATTTAT CAAAATCCAG ACCATCGTCC AATGTTTCCA TGTGCAAATA TAGTTTGGGA AGGCATCAAA GTCAGGCTAC TGGTTATCGA CCTGTCCGTG TTGACTGGAA AGATCTCGAT AAGTGCAATG TCTGTTACAT GGATGAGGAG TATGAGAACA ATTTGTTCCT GCAGTGTGAT AAATGTAGAA TGATGGTCCA TGCTAAATGC TATGGAGAGC TAGAACCCTG TGATGGTGCT TTGTGGTTAT GCAACTTATG TCGTCCTGGC GCTCCTGATA TACCTCCACG GTGTTGTCTT TGTCCTTTAG TAGGTGGTGC TATGAAGCAG ACAACTGATG GGCGCTGGGC TCATCTTGCT TGTGCTATAT GGATCCCAGA AACATGTTTA TCTGATGTCA AGAAGATGGA ACCGATTGAT GGGGTGAATA AAGTCAGTAA GGATCGCTGG AAATTAATGT GCACCATCTG CGGGGTATCT TATGGAGCTT GTATCCAATG TTCGAACAAT TCTTGTCGTG TGGCATATCA TCCTCTCTGC GCGCGAGCTG CTGGTCTCTG TGTTGAGCTT GAGAATGAGG ATAGACTTTT TCTTCAGTCA GTGGAGGATG AAGAAGCAGA TCAGTGTATC CGCATGCTTT CATTCTGCAA GAGGCATCGA CAAACATCAA CTGCCTGCCT AGGATCAGAA AACAGGATAA AATCCGTTAC TCAGAAAACT TCCGAGTATC TCCCACCACC TAATCCATCT GGCTCTGCTC GGACTGAGCC TTATAATTGC TTTGGCAGAA GAGGGCGGAA AGAACCTGAA GCTCTTGCTG CTGCTTCTTC AAAGCGGTTA TTTGTTGAGA ATCAGCCATA TGTTATTGGT GGTTACTCTA AACTTGAGTT TTCAACTTAT GAATGCATTC ACGGATCCAA GGTGTCACAG ATGAATACTC CAAGCAACAT TCTTTCTATG GCTGAGAAAT ATAGATACAT GAAGGAAACA TACAGGAAGA GACTGGCATT TGGGAAATCA GGAATTCATG GTTTTGGCAT ATTCGCAAAA CTTCCGCACA AGGCCGGAGA TATGATGATT GAATACACCG GAGAACTTGT TAGACCGTCT ATAGCTGACA AAAGAGAACG TCTTATCTAC AATTCAATGG TGGGTGCAGG GACTTACATG TTTAGAATTG ATGATAAACG AGTCATAGAT GCTACAAGGG CAGGAAGCAT TGCCCACCTG ATTAATCATT CCTGTGTGCC CAATTGCTAT TCAAGAGTCA TCACTGTTAA TGGAGAGGAG CACATTATCA TTTTCGCAAA GAGGGATATC CCTAAATGGG AAGAGCTGAC CTATGACTAT AGGTTCTTTT CAATTGGTGA GCGCCTTTCA TGTTCATGTG GGTTCCAAGG GTGTCGAGGT GTTGTGAATG ATACAGAAGC AGAAGCACAA CAGTCGAAAA TATGTGTTCC TCGTTGTGAA CTAATAGACT GGACCGAATA ATAGGCTGAC TAAAACTATA G |
| Length | 3241 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 14190790.. 14198088 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G31650.1 |
| Description | homologue of trithorax |
| TAIR curator summary | Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P. |
| Alias | [ATX1][SDG27][homologue of trithorax][SET DOMAIN PROTEIN 27] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg919570 | DNA polymerase epsilon catalytic subunit |
| 9.94987 |
Ahg479261 | |
| 12.7279 |
Ahg472990 | DEAD/DEAH box RNA helicase family protein |
| 16.3707 |
Ahg492529 | Disease resistance protein (TIR-NBS class) |
| 24.3721 |
Ahg943440 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 25.2982 |
Ahg330506 | GTP binding;GTP binding |
| 28.9828 |
Ahg324014 | Transmembrane amino acid transporter family protein |
| 31.6228 |
Ahg906268 | D-3-phosphoglycerate dehydrogenase |
| 35.327 |
Ahg479519 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
| 38.5357 |
Ahg920008 | endonuclease/exonuclease/phosphatase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|