Detail



ID : Ahg324229

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324229|fgenesh1_pm.C_scaffold_5001773
Sequence
ATGGCGGCCA AGATTCCTGG TGGAGGCTGC TCATGGCGAC GCTTTGACAG GAAGAGAACA CCATCTCGAT TTCTGATATT CTCTGTTCGA GCCTCTAGTT CCATGGATGA TATGGACACA GTCTACAAGC AATTGGGATT GTTTTCACTA AAGAAGAAGA TTAAAGATGT TGTTCTTAAG GCTGAGATGT TTGCACCGGA TGCTCTTGAG CTTGAAGAAG AGCAATGGAT AAAGCAAGAA GAAACAATGC GTTACTATGA TTTATGGGAT GATCCAGCTA AATCTGATGA GATTCTTCTC AAATTAGCTG ATCGAGCAAA AACAGTTGAT TCTCTCAAAG ACCTCAAATA CAAGGCAGAA GAAGCTAAGC TAATCATACA ATTGGGTGAG ATGGATGCTA TAGATTACAG TCTCTTTGAG CAAGCTTACG ATTCATCGCT CGATGTAAGC AGATCTTTGC ATCACTATGA GATGTCTAAG CTTCTTAGGG ATCAATATGA CGCTGAAGGC GCTTGTATGA TTATTAAATC TGGATCTCAA GACGCAAAAT CTCAGGATTT GCAGATATGG ACAGAGCAAG TTGTAAGTAT GTATATCAAA TGGGCAGAAA AGCTAGGCCA AAACGCTAGA GTGGCTGAGA AATGTAGCTT CTTGAGCAAT AAAAGTGGTG TAAATTCAGC CACAATAGAG TTTGAATTCG ACTTTGCTTA TGGTTATCTC TTAGGTGAGC GAGGCGTGCA CCGCCTTATC ATAAGTTCCA CTTCTAGTGA GGAATGTTCA GCGACTGTTG ATATCATACC GCTATTCTTG AGAGCATCTC CTGATTTTGA AGTAAAGGAA GATGATTTGA TTGTTTCGTA TCCTGCAAAA GAGAACCATA AAATAGCTGA GAATATGGTT AGTATTCAAC ATATACCGAG TGGAATAACT GTTGAATCGT CAGGAGAAAG AAACCGGTTT GCAAACAGGA TCAAAGCGCT AAACCGATTA AAGGCGAAGC TGCTTGTGAT AGCAAAAGAG CAGAAAATTT CGGATGTAAA TAAAATAAAC AGCAAGAACA TTTTGGAACC ATGGGAAGAA ACCAGGAGAT ATGTCTCTAA GGGTCAAAAG ATGGTGGTTG ATAGAAAAAC CGGTTTAGAG ATTCTGGACC TGAAATCGGT CTTGGATGGG AACATTGGAC CACTCCTTGG AGCTCATATT AGTATGAGAA GATCAATTGA TGCGATTTAG 
Length1230
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17287824.. 17289541
Download Sequence
A.thaliana
AGI-codeAT3G57190.1
Descriptionpeptide chain release factor, putative
TAIR curator summary
Alias[PrfB3][peptide chain release factor 3]
Gene coexpression
MR
MR Locus Description
10.8167 Ahg478015 Pseudouridine synthase family protein
11.4891 Ahg318761 titan9
15.4919 Ahg922785 conserved peptide upstream open reading frame 19
22.6053 Ahg495713
22.6716 Ahg487187 Plant protein 1589 of unknown function
28.7228 Ahg482373
39.95 Ahg923698 indole-3-acetic acid inducible 18
41.9285 Ahg478324 Calcineurin-like metallo-phosphoesterase superfamily protein
45.3652 Ahg491524 RNA-binding (RRM/RBD/RNP motifs) family protein
47.3709 Ahg485129 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression