Detail



ID : Ahg922785

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922785|scaffold_104066.1
Sequence
GTGGAGTGTG AAGAATCTTT TATGTCTGAA CAGGCTTCTC TCTTTCAATC ATCTATCCGG CTTTTAGGGG AGTACTGTCC TATATCTAGG AAAAAGTCCA CTCATAAAGT TGGTGGTTTG CGTCTTGGAT CTTTTGAAGC CTTCAATCGC AACAACACGA GCTTTTCCGG TTTTCAGTTT ATGCAACCGA GTGATTATCA CTGTCTCTTC TGACATCCCT CGTCTGTTTA CGT 
Length233
Protein Sequence
Protein Residue
Map Locationscaffold_1: 17057809.. 17058041
Download Sequence
A.thaliana
AGI-codeAT1G36732.1
Descriptionconserved peptide upstream open reading frame 19
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF19 represents a conserved upstream opening reading frame relative to major ORF AT1G36730.1
Alias[CPuORF19][conserved peptide upstream open reading frame 19]
Gene coexpression
MR
MR Locus Description
5 Ahg922784 conserved peptide upstream open reading frame 19
6.32456 Ahg478288 Tudor/PWWP/MBT superfamily protein
12 Ahg484418 Tetratricopeptide repeat (TPR)-like superfamily protein
15.4919 Ahg324229 peptide chain release factor, putative
16 Ahg489869 HSP20-like chaperones superfamily protein
19.0526 Ahg496104 heat shock protein 18.2
20.199 Ahg479981 FTSH protease 9
28.8097 Ahg913155
33.5857 Ahg893435 FTSH protease 6
36.565 Ahg471804 heat shock protein 70B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression