| Annotation |
|---|
| Description | jgi|Araly1|488521|fgenesh2_kg.6__1655__AT5G16620.1 |
| Sequence |
CTTCTTCCTC ATCATATCTT TCCTCCTCTT CACCAGAATC GTTTCAGGCT CTTCTTCTTC TGTTTCTTTT TCTCCAAAGA AACAATTAGA AATGGAGAAC CTAACCCTAG TTTCTTGCTC AGCTTCTTCT CCAAAGCTGT TAATTGGATG CAATTTCACT TCCTCGCTTA AAAACCCTAC TGGGTTTTCT CGTCGGACTC CTAAAATTGT CCTCCGCTGC TCCAAAATCT CTTCCTCTGC TCAATCTCAA TCTCCCTCTT CGCGTCCGGA TAACGTTGGA GAAATCGTGG TTGTGAAACA GAGAAGCAAA GCTTTTGCAA GTATATTTTC ATCGAGTCGT GATCAACAGA CAACTTCTGT TGCTTCCCCT AGTGTGCCTA TGCCACCACC ATCTTCATCA ACCATAGGAT CACCACTTTT CTGGATTGGT GTTGGAGTTG GGCTATCAGC TTTGTTCTCA TTGGTAACTT CAAATTTAAA GAAATATGCA ATGCAAACAG CTATGAAGAC GATGATGAAC CAAATGAATA CGCAAAATAG CCAGTTTAAT AATCCTGGAT TCCCATCAGG ATCACCTTTT CCGTTTCCAT TCCCTCCTCA AACAAGTCCT GCCTCCTCGC CCTTCCAATC TCAATCCCAG TCTTCAGGTG CTACTGTTGA TGTGACGGCG ACAAAAGTAG ATACACCTCC TTCAACTAAA CCGAAACCTA CACCTGCAAA GGATATAGAA GTGGATAAGC CAAGTGTTGT CTTAGAGGCA AGCAAAGAGA AGAAAGAAGA AAAGAACTAT GCCTTTGAAG ACATTTCACC CGAGGAAACC ACCAAAGAAA GCCCATTTAG CAACTATGCT GAAGTCTCTG AAACTAGTTC CCCCAAAGAA ACTCGCTTGT TTGAGGATGT TTTGCAAAAT GGAGCTGGTC CGGCAAATGG TGCCACTGCT TCAGAGGTTT TTCAATCTTT GGGCGGTGGG AAAGGAGGGC CGGGTTTGTC TGTAGAAGCT TTAGAGAAAA TGATGGAAGA TCCAACAGTC CAGAAGATGG TTTACCCATA CTTGCCTGAG GAGATGAGAA ACCCAGAAAC TTTCAAATGG ATGCTTAAAA ATCCTCAGTA CCGTCAACAG CTACAGGACA TGTTGAATAA TATGAGTGGG AGTGGTGAAT GGGACAAGCG AATGACAGAT ACATTGAAGA ATTTTGACCT GAATAGTCCT GAAGTGAAGC AACAATTCAA TCAAATAGGA CTGACTCCAG AAGAAGTCAT ATCTAAGATC ATGGAGAACC CTGATGTTGC CATGGCATTC CAGAATCCTA GAGTCCAAGC AGCATTAATG GAATGCTCAG AGAACCCAAT GAACATCATG AAGTACCAAA ACGACAAAGA GGTAATGGAT GTGTTCAACA AGATATCGCA GCTCTTCCCA GGAATGACGG GTTGAAAAAG CTCACGTCTT TTGGATCAAA AATGTCACAT TGTCTTTAGC TTTTTGTAGG AGAAAATTAT GTTTTTTTTA AAAAAGGATC TTCAGTTTTG TTCAGATCAG AGAATTGTGT ACCATGTTAA TCTTAAACGC GATCGCGAAT TCGAGTCGTG TAAAACGAC |
| Length | 1599 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6504106.. 6507930 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G16620.1 |
| Description | hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | chloroplast protein import (Tic40) |
| Alias | [ATTIC40][PDE120][TIC40][translocon at the inner envelope membrane of chloroplasts 40][pigment defective embryo 120] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg919013 | Coproporphyrinogen III oxidase |
| 7 |
Ahg478824 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 9.48683 |
Ahg493601 | acetyl Co-enzyme a carboxylase biotin carboxylase subunit |
| 10 |
Ahg324617 | embryo defective 1703 |
| 13.7113 |
Ahg938261 | diaminopimelate epimerase family protein |
| 19.3649 |
Ahg491312 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| 30.8545 |
Ahg944415 | Pentatricopeptide repeat (PPR) superfamily protein |
| 32.909 |
Ahg489681 | ribosomal protein S1 |
| 34.0588 |
Ahg485806 | fructokinase-like 1 |
| 41.4246 |
Ahg921780 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|